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[2010年山东省环境污水监测中脊髓灰质炎病毒分离株的基因特征分析]

[Genetic characterization of poliovirus isolates from environmental sewage surveillance in Shandong, 2010].

作者信息

Zhang Yan, Ji Sheng-Xiang, Zhang Xiao-Li, Li Yan, Zhang Yong, Tao Ze-Xin, Wang Hai-Yan, Zhu Shuang-Li, Song Li-Zhi, Feng Yi, Liu Yao, Ji Feng, Lin Xiao-Juan, Feng Lei, Hiromu Yoshida, Xu Ai-Qiang

机构信息

Shandong Provincial Key Laboratory of Infectious Disease Control and Prevention, Shandong Provincial Center for Disease Control and Prevention, Jinan 250014, China.

出版信息

Bing Du Xue Bao. 2011 Jul;27(4):337-41.

Abstract

To investigate the genetic characteristics of poliovirus isolates from environmental sewage surveillance in Shandong province, we collected sewage samples in Jinan and Linyi City. Serotyping and VP1/ 3D sequencing were performed on polioviruses isolated from the concentrated sewage samples, and VP1 mutation and recombination were analyzed. Thirty-two of sewage samples were collected, and polioviruses were detected in 10 of the samples with a positive rate of 31.3%. Eighteen Sabin strains were isolated including three type 1, nine type 2, and six type 3 polioviruses, and the number of nucleotide substitutions in VP1 coding region varied from 0 to 4. Recombination was found in three Sabin 2 and four Sabin 3 polioviruses. Analysis of neurovirulence sites of VP1 revealed that one Sabin 1 vaccine strain had a nucleotide change of A to G at nt 2749, one Sabin 2 strain had a nucleotide change of A to G at nt 2908, three Sabin 2 strains had a nucleotide change of U to C at nt 2909, and all six Sabin 3 strains had a nucleotide change of C to U at nt 2493. Poliovirus vaccine strains could be isolated from environmental sewage with a high rate of gene recombination and back mutation of neuvirulence-associated sites. None of wild-type poliovirus or vaccine-derived poliovirus was detected.

摘要

为研究山东省环境污水监测中脊髓灰质炎病毒分离株的基因特征,我们在济南市和临沂市采集了污水样本。对从浓缩污水样本中分离出的脊髓灰质炎病毒进行血清分型和VP1/3D测序,并分析VP1突变和重组情况。共采集32份污水样本,其中10份检测到脊髓灰质炎病毒,阳性率为31.3%。分离出18株Sabin株,包括3株1型、9株2型和6株3型脊髓灰质炎病毒,VP1编码区核苷酸替换数为0至4。在3株Sabin 2型和4株Sabin 3型脊髓灰质炎病毒中发现重组现象。VP1神经毒力位点分析显示,1株Sabin 1疫苗株在nt 2749处有A到G的核苷酸变化,1株Sabin 2株在nt 2908处有A到G的核苷酸变化,3株Sabin 2株在nt 2909处有U到C的核苷酸变化,所有6株Sabin 3株在nt 2493处有C到U的核苷酸变化。脊髓灰质炎病毒疫苗株可从环境污水中分离出来,基因重组率高,神经毒力相关位点存在回复突变。未检测到野生型脊髓灰质炎病毒或疫苗衍生脊髓灰质炎病毒。

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