Genetic Improvement of Fruit and Vegetables Laboratory, United States Department of Agriculture-Agricultural Research Service, Beltsville, Maryland, United States of America.
PLoS One. 2011;6(8):e23555. doi: 10.1371/journal.pone.0023555. Epub 2011 Aug 24.
Cellulose binding domains (CBD) in the carbohydrate binding module family 1 (CBM1) are structurally conserved regions generally linked to catalytic regions of cellulolytic enzymes. While widespread amongst saprophytic fungi that subsist on plant cell wall polysaccharides, they are absent amongst most plant pathogenic fungal cellulases. A genome wide survey for CBM1 was performed on the highly destructive plant pathogen Phytophthora infestans, a fungal-like Stramenopile, to determine if it harbored cellulolytic enzymes with CBM1. Only five genes were found to encode CBM1, and none were associated with catalytic domains. Surveys of other genomes indicated that the CBM1-containing proteins, lacking other domains, represent a unique group of proteins largely confined to the Stramenopiles. Immunolocalization of one of these proteins, CBD1, indicated that it is embedded in the hyphal cell wall. Proteins with CBM1 domains can have plant host elicitor activity, but tests with Agrobacterium-mediated in planta expression and synthetic peptide infiltration failed to identify plant hypersensitive elicitation with CBD1. A structural basis for differential elicitor activity is proposed.
纤维素结合结构域 (CBD) 存在于碳水化合物结合模块家族 1 (CBM1) 中,是结构上保守的区域,通常与纤维素酶的催化结构域相连。尽管在以植物细胞壁多糖为食的腐生真菌中广泛存在,但大多数植物病原真菌纤维素酶中却不存在 CBD。对高度破坏性的植物病原体马铃薯晚疫病菌(Phytophthora infestans)进行了全基因组范围内的 CBM1 调查,以确定其是否含有具有 CBD1 的纤维素酶。结果仅发现 5 个基因编码 CBM1,且均与催化结构域无关。对其他基因组的调查表明,缺乏其他结构域的含 CBD1 的蛋白质代表了一组独特的蛋白质,主要局限于不等鞭毛类。对其中一种蛋白质 CBD1 的免疫定位表明,它嵌入在菌丝细胞壁中。具有 CBD1 结构域的蛋白质可能具有植物宿主激发子活性,但用农杆菌介导的体内表达和合成肽渗透的测试未能鉴定出与 CBD1 相关的植物超敏反应激发子。提出了一个关于差异激发子活性的结构基础。