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通过氘代交换实验揭示 G 蛋白偶联受体 β2 肾上腺素受体构象总体的配体依赖性扰动

Ligand-dependent perturbation of the conformational ensemble for the GPCR β2 adrenergic receptor revealed by HDX.

机构信息

Department of Molecular Therapeutics, The Scripps Research Institute, Scripps Florida, Jupiter, FL 33458, USA.

出版信息

Structure. 2011 Oct 12;19(10):1424-32. doi: 10.1016/j.str.2011.08.001. Epub 2011 Sep 1.

DOI:10.1016/j.str.2011.08.001
PMID:21889352
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3196059/
Abstract

Mechanism of G protein-coupled receptor (GPCR) activation and their modulation by functionally distinct ligands remains elusive. Using the technique of amide hydrogen/deuterium exchange coupled with mass spectrometry, we examined the ligand-induced changes in conformational states and stability within the beta-2-adrenergic receptor (β(2)AR). Differential HDX reveals ligand-specific alterations in the energy landscape of the receptor's conformational ensemble. The inverse agonists timolol and carazolol were found to be most stabilizing even compared with the antagonist alprenolol, notably in intracellular regions where G proteins are proposed to bind, while the agonist isoproterenol induced the largest degree of conformational mobility. The partial agonist clenbuterol displayed conformational effects found in both the inverse agonists and the agonist. This study highlights the regional plasticity of the receptor and characterizes unique conformations spanning the entire receptor sequence stabilized by functionally selective ligands, all of which differ from the profile for the apo receptor.

摘要

G 蛋白偶联受体(GPCR)的激活机制及其与功能不同配体的相互作用仍然难以捉摸。本研究采用酰胺氢/氘交换结合质谱技术,检测了β2-肾上腺素能受体(β2AR)构象状态和稳定性的配体诱导变化。差异 HDX 揭示了受体构象整体的配体特异性能量景观变化。反向激动剂替莫洛尔和卡唑洛尔被发现比拮抗剂心得安更稳定,特别是在 G 蛋白结合的细胞内区域,而激动剂异丙肾上腺素诱导了最大程度的构象灵活性。部分激动剂克仑特罗显示出与反向激动剂和激动剂相似的构象效应。本研究强调了受体的区域可塑性,并描述了由功能选择性配体稳定的跨越整个受体序列的独特构象,这些构象都与apo 受体的特征不同。

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本文引用的文献

1
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Nature. 2011 May 18;474(7352):521-5. doi: 10.1038/nature10136.
2
Methods for the Analysis of High Precision Differential Hydrogen Deuterium Exchange Data.高精度差分氢氘交换数据分析方法
Int J Mass Spectrom. 2011 Apr 30;302(1-3):59-68. doi: 10.1016/j.ijms.2010.08.002.
3
Structure of an agonist-bound human A2A adenosine receptor.激动剂结合的人 A2A 腺苷受体结构。
Science. 2011 Apr 15;332(6027):322-7. doi: 10.1126/science.1202793. Epub 2011 Mar 10.
4
Differential hydrogen/deuterium exchange mass spectrometry analysis of protein-ligand interactions.蛋白质-配体相互作用的差分式氢/氘交换质谱分析。
Expert Rev Proteomics. 2011 Feb;8(1):43-59. doi: 10.1586/epr.10.109.
5
The structural basis for agonist and partial agonist action on a β(1)-adrenergic receptor.激动剂和部分激动剂在β(1)-肾上腺素能受体上作用的结构基础。
Nature. 2011 Jan 13;469(7329):241-4. doi: 10.1038/nature09746.
6
Structure and function of an irreversible agonist-β(2) adrenoceptor complex.不可逆激动剂-β(2)肾上腺素能受体复合物的结构与功能。
Nature. 2011 Jan 13;469(7329):236-40. doi: 10.1038/nature09665.
7
Structure of a nanobody-stabilized active state of the β(2) adrenoceptor.β2 肾上腺素能受体的纳米体稳定的活性状态结构。
Nature. 2011 Jan 13;469(7329):175-80. doi: 10.1038/nature09648.
8
Structure of the human dopamine D3 receptor in complex with a D2/D3 selective antagonist.人源多巴胺 D3 受体与 D2/D3 选择性拮抗剂复合物的结构。
Science. 2010 Nov 19;330(6007):1091-5. doi: 10.1126/science.1197410.
9
Hydrogen/deuterium exchange reveals distinct agonist/partial agonist receptor dynamics within vitamin D receptor/retinoid X receptor heterodimer.氢/氘交换揭示了维生素 D 受体/视黄酸 X 受体异二聚体中独特的激动剂/部分激动剂受体动力学。
Structure. 2010 Oct 13;18(10):1332-41. doi: 10.1016/j.str.2010.07.007.
10
Structures of the CXCR4 chemokine GPCR with small-molecule and cyclic peptide antagonists.小分子和环肽拮抗剂与 CXCR4 趋化因子 GPCR 的结构。
Science. 2010 Nov 19;330(6007):1066-71. doi: 10.1126/science.1194396. Epub 2010 Oct 7.