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重组为有效种群大小和旧世界人类群体的历史提供了新的见解。

Recombination gives a new insight in the effective population size and the history of the old world human populations.

出版信息

Mol Biol Evol. 2012 Jan;29(1):25-30. doi: 10.1093/molbev/msr213. Epub 2011 Sep 1.

DOI:10.1093/molbev/msr213
PMID:21890475
Abstract

The information left by recombination in our genomes can be used to make inferences on our recent evolutionary history. Specifically, the number of past recombination events in a population sample is a function of its effective population size (Ne). We have applied a method, Identifying Recombination in Sequences (IRiS), to detect specific past recombination events in 30 Old World populations to infer their Ne. We have found that sub-Saharan African populations have an Ne that is approximately four times greater than those of non-African populations and that outside of Africa, South Asian populations had the largest Ne. We also observe that the patterns of recombinational diversity of these populations correlate with distance out of Africa if that distance is measured along a path crossing South Arabia. No such correlation is found through a Sinai route, suggesting that anatomically modern humans first left Africa through the Bab-el-Mandeb strait rather than through present Egypt.

摘要

我们基因组中的重组信息可用于推断我们最近的进化历史。具体来说,群体样本中过去重组事件的数量是其有效种群大小 (Ne) 的函数。我们应用了一种名为Identifying Recombination in Sequences (IRiS) 的方法,来检测 30 个旧世界人群中的特定过去重组事件,以推断它们的 Ne。我们发现,撒哈拉以南非洲人群的 Ne 大约是非洲以外人群的四倍,而且在非洲以外,南亚人群的 Ne 最大。我们还观察到,如果沿着穿过南阿拉伯的路径来衡量离开非洲的距离,这些人群的重组多样性模式与该距离相关。如果通过西奈路线,则找不到这种相关性,这表明现代人最初是通过曼德海峡离开非洲的,而不是通过现在的埃及。

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