Dyson H J, Gippert G P, Case D A, Holmgren A, Wright P E
Department of Molecular Biology, Research Institute of Scripps Clinic, La Jolla, California 92037.
Biochemistry. 1990 May 1;29(17):4129-36. doi: 10.1021/bi00469a016.
The three-dimensional solution structure of reduced (dithiol) thioredoxin from Escherichia coli has been determined with distance and dihedral angle constraints obtained from 1H NMR spectroscopy. Reduced thioredoxin has a well-defined global fold consisting of a central five-strand beta-sheet and three long helices. The beta-strands are packed in the sheet in the order beta 1 beta 3 beta 2 beta 4 beta 5, with beta 1, beta 3, and beta 2 parallel and beta 2, beta 4, and beta 5 arranged in an antiparallel fashion. Two of the helices connect strands of the beta-sheet: alpha 1 between beta 1 and beta 2 and alpha 2 between beta 2 and beta 3. Strands beta 4 and beta 5 are connected by a short loop that contains a beta-bulge. Strands beta 3 and beta 4 are connected by a long loop that contains a series of turn-like or 3(10) helical structures. The active site Cys-Gly-Pro-Cys sequence forms a protruding loop between strand beta 2 and helix alpha 2. The structure is very similar overall to that of oxidized (disulfide) thioredoxin obtained from X-ray crystal structure analysis but differs in the local conformation of the active site loop. The distance between the sulfurs of Cys 32 and Cys 35 increases from 2.05 A in the disulfide bridge to 6.8 +/- 0.6 A in the dithiol of reduced thioredoxin, as a result of a rotation of the side chain of Cys 35 and a significant change in the position of Pro 34. This conformational change has important implications for the mechanism of thioredoxin as a protein disulfide oxidoreductase.
通过1H NMR光谱获得的距离和二面角约束条件,确定了来自大肠杆菌的还原型(二硫醇)硫氧还蛋白的三维溶液结构。还原型硫氧还蛋白具有明确的整体折叠结构,由一个中央五链β-折叠片层和三个长螺旋组成。β-链在片层中的排列顺序为β1β3β2β4β5,其中β1、β3和β2平行,β2、β4和β5呈反平行排列。其中两个螺旋连接β-折叠片层的链:α1在β1和β2之间,α2在β2和β3之间。β4和β5链由一个包含β-凸起的短环连接。β3和β4链由一个包含一系列类似转角或3(10)螺旋结构的长环连接。活性位点Cys-Gly-Pro-Cys序列在β2链和α2螺旋之间形成一个突出的环。该结构总体上与通过X射线晶体结构分析获得的氧化型(二硫键)硫氧还蛋白非常相似,但活性位点环的局部构象有所不同。由于Cys 35侧链的旋转和Pro 34位置的显著变化,Cys 32和Cys 35硫原子之间的距离从二硫键中的2.05 Å增加到还原型硫氧还蛋白二硫醇中的6.8±0.6 Å。这种构象变化对硫氧还蛋白作为蛋白质二硫键氧化还原酶的机制具有重要意义。