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从褐腐担子菌胎盘 Postia 中鉴定和功能表征细胞色素 P450 单加氧酶。

Molecular identification and functional characterization of cytochrome P450 monooxygenases from the brown-rot basidiomycete Postia placenta.

机构信息

Faculty of Agriculture, Kyushu University, Higashi-ku, Fukuoka, Japan.

出版信息

Arch Microbiol. 2012 Apr;194(4):243-53. doi: 10.1007/s00203-011-0753-2. Epub 2011 Sep 22.

Abstract

We explored the molecular diversity and functional capabilities of cytochrome P450 monooxygenases (P450s) from the brown-rot basidiomycete Postia placenta. Using bioinformatic and experimental data, we found 250 genes of P450s in the whole genome, including 60 putative allelic variants. Phylogenetic analysis revealed the presence of 42 families, including 18 novel families. Comparative phylogenetic analysis of P450s from P. placenta and the white-rot basidiomycete Phanerochaete chrysosporium suggested that vigorous gene duplication and molecular evolution occurred after speciation of basidiomycetes. Among the 250 gene models, 184 were isolated as full-length cDNA and transformed into Saccharomyces cerevisiae to construct a functional library in which recombinant P450s were co-expressed with yeast NADPH-P450 oxidoreductase. Using this library, the catalytic potentials of P450s against a wide variety of compounds were investigated. A functionomic survey allowed the discovery of novel catalytic properties of P. placenta P450s. The phylogenetic diversity of the CYP53 family in P. placenta was clear, and CYP53D2 is capable of converting stilbene derivatives. This is the first report of this peculiar function of the CYP53 family. Our increased understanding of the molecular and functional diversity of P450s in this fungus will facilitate comprehension of metabolic diversity in basidiomycetes and has future biotechnology applications.

摘要

我们探索了来自褐腐担子菌胎盘 Postia 中的细胞色素 P450 单加氧酶(P450s)的分子多样性和功能能力。使用生物信息学和实验数据,我们在整个基因组中发现了 250 个 P450 基因,包括 60 个假定的等位基因变体。系统发育分析显示存在 42 个家族,包括 18 个新家族。胎盘 P450s 和白腐担子菌糙皮侧耳 Phanerochaete chrysosporium 的比较系统发育分析表明,在担子菌分化后,发生了剧烈的基因复制和分子进化。在 250 个基因模型中,有 184 个被分离为全长 cDNA,并转化为酿酒酵母,以构建一个功能文库,其中重组 P450s 与酵母 NADPH-P450 氧化还原酶共表达。使用这个文库,研究了 P450s 对各种化合物的催化潜力。功能组学调查允许发现胎盘 P450s 的新催化特性。胎盘 CYP53 家族的系统发育多样性很明显,CYP53D2 能够转化芪类衍生物。这是 CYP53 家族这一特殊功能的首次报道。我们对该真菌中 P450s 的分子和功能多样性的深入了解将有助于理解担子菌的代谢多样性,并具有未来的生物技术应用前景。

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