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抗极端耐受南极cryptoen-dolithic 真菌 UV-B 诱导 DNA 损伤:PCR 检测。

Resistance to UV-B induced DNA damage in extreme-tolerant cryptoendolithic Antarctic fungi: detection by PCR assays.

机构信息

Department of Ecology and Sustainable Economic Development, Università degli Studi della Tuscia, Largo dell'Università snc, 01100 Viterbo, Italy.

出版信息

Fungal Biol. 2011 Oct;115(10):937-44. doi: 10.1016/j.funbio.2011.02.016. Epub 2011 Mar 1.

DOI:10.1016/j.funbio.2011.02.016
PMID:21944205
Abstract

Cryptoendolithic Antarctic black fungi are adapted to the harshest terrestrial conditions as in the ice-free area of the McMurdo Dry Valleys. Recently, surviving space simulated conditions proves their bewildering extremotolerance. In order to investigate the potential DNA damage and their response after UV-B exposition, two strains of Antarctic cryptoendolithic black fungi, Cryomyces antarcticus CCFEE 534 and Cryomyces minteri CCFEE 5187, were irradiated at different UV-B doses. Since conventional methods cannot be applied to these organisms, the effect on the genome was assessed by RAPD and rDNA amplification PCR based assays; the results were compared with the responses of Saccharomyces pastorianus DBVPG 6283 treated with the same conditions. Results showed that template activity was drastically inhibited in S. pastorianus after irradiation. Dramatic changes in the RAPD profiles showed after 30 min of exposure while the rDNA amplification of SSU, LSU, and ITS portions failed after 30, 60, and 90 min of exposure respectively. No alteration was detected in the templates of the Antarctic strains where both RAPD profiles and rDNA PCR amplifications were unaffected even after 240 min of exposure. The electroferograms of the rDNA portions of Cryomyces strains were perfectly readable and conserved whilst the analyses revealed a marked alteration in S. pastorianus confirming the high resistance of the Antarctic strains to UV-B exposure.

摘要

南极 cryptoendolithic 黑真菌适应最恶劣的陆地条件,如麦克默多干谷无冰区。最近,模拟太空条件的生存实验证明了它们令人惊讶的极端耐受性。为了研究潜在的 DNA 损伤及其在 UV-B 暴露后的反应,两种南极 cryptoendolithic 黑真菌,Cryomyces antarcticus CCFEE 534 和 Cryomyces minteri CCFEE 5187,在不同的 UV-B 剂量下进行了照射。由于传统方法不能应用于这些生物,因此通过 RAPD 和 rDNA 扩增 PCR 检测来评估对基因组的影响;将结果与同样条件下处理的 Saccharomyces pastorianus DBVPG 6283 的反应进行了比较。结果表明,照射后 S. pastorianus 的模板活性被严重抑制。在 30 分钟的暴露后,RAPD 图谱发生了剧烈变化,而在 30、60 和 90 分钟的暴露后,SSU、 LSU 和 ITS 部分的 rDNA 扩增失败。在南极菌株的模板中没有检测到任何变化,即使在 240 分钟的暴露后,RAPD 图谱和 rDNA PCR 扩增都没有受到影响。Cryomyces 菌株 rDNA 部分的电泳图谱完全可读且保持不变,而分析显示 S. pastorianus 发生了明显的改变,证实了南极菌株对 UV-B 暴露的高度抗性。

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