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嗜热四膜虫rRNA IVS序列参与自身剪接反应的二级结构:一项新的计算机分析

Secondary structures of Tetrahymena thermophila rRNA IVS sequence involved in its self-splicing reactions: a new computer analysis.

作者信息

Benedetti G, De Santis P, Morosetti S

机构信息

Department of Chemistry, University of Rome I, Italy.

出版信息

J Biomol Struct Dyn. 1990 Jun;7(6):1269-77. doi: 10.1080/07391102.1990.10508564.

DOI:10.1080/07391102.1990.10508564
PMID:2194496
Abstract

The secondary structures of Tetrahymena thermophila rRNA IVS sequence involved in the self-splicing reactions, are theoretically investigated with a refined computer method previously proposed, able to select a set of the deepest free energy RNA secondary structures under constraints of model hypotheses and experimental evidences. The secondary structures obtained are characterized by the close proximity of self-reactions sites and account for double mutations experiments, and differential digestion data.

摘要

利用先前提出的一种改进的计算机方法,从理论上研究了嗜热四膜虫rRNA IVS序列中参与自我剪接反应的二级结构。该方法能够在模型假设和实验证据的约束下,选择一组具有最低自由能的RNA二级结构。所获得的二级结构的特点是自我反应位点紧密相邻,并能解释双突变实验和差异消化数据。

相似文献

1
Secondary structures of Tetrahymena thermophila rRNA IVS sequence involved in its self-splicing reactions: a new computer analysis.嗜热四膜虫rRNA IVS序列参与自身剪接反应的二级结构:一项新的计算机分析
J Biomol Struct Dyn. 1990 Jun;7(6):1269-77. doi: 10.1080/07391102.1990.10508564.
2
Three-dimensional folding of Tetrahymena thermophila rRNA IVS sequence: a proposal.嗜热四膜虫核糖体RNA内含子序列的三维折叠:一项提议。
J Biomol Struct Dyn. 1991 Apr;8(5):1045-55. doi: 10.1080/07391102.1991.10507864.
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Deletion of nonconserved helices near the 3' end of the rRNA intron of Tetrahymena thermophila alters self-splicing but not core catalytic activity.嗜热四膜虫rRNA内含子3'端附近非保守螺旋的缺失会改变自我剪接,但不会改变核心催化活性。
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Exon sequences distant from the splice junction are required for efficient self-splicing of the Tetrahymena IVS.四膜虫IVS高效自我剪接需要远离剪接位点的外显子序列。
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