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从日本水样中分离出的水生甲基杆菌的基因分型及耐氯性

Genotyping and chlorine-resistance of Methylobacterium aquaticum isolated from water samples in Japan.

作者信息

Furuhata Katsunori, Banzai Azusa U, Kawakami Yasushi, Ishizaki Naoto, Yoshida Yoshihiro, Goto Keiichi, Fukuyama Masafumi

机构信息

School of Life and Environmental Science, Azabu University, Kanagawa, Japan.

出版信息

Biocontrol Sci. 2011 Sep;16(3):103-7. doi: 10.4265/bio.16.103.

DOI:10.4265/bio.16.103
PMID:21946320
Abstract

For microbial ecological analysis, 14 strains of Methylobacterium aquaticum isolated from water samples were subjected to clustering analysis on the basis of ribotyping and RAPD-PCR tests. The ribopatterns after digestion with EcoRI obtained from 14 strains of M. aquaticum were used to divide the strains into two groups (Groups I and II) with a similarity of 55%. From the analysis of RAPD patterns using primer 208, the 14 strains were divided into 3 groups (A-C) based on a homology of 45% or greater, and from that using primer 272, there were 4 groups (A-D) based on a homology of 50% or greater. The chlorine resistance (99.9% CT values) of these isolates was also experimentally confirmed, and we attempted to define the connection between chlorine resistance and the geno-cluster. The average CT value of group I was 0.89 mg•min/l and the average of group II was 0.69 mg•min/l. No remarkable differences in the CT values for the groups were found.

摘要

为进行微生物生态分析,对从水样中分离出的14株水生甲基杆菌进行了基于核糖体分型和随机扩增多态性DNA聚合酶链反应(RAPD-PCR)测试的聚类分析。用EcoRI消化14株水生甲基杆菌后得到的核糖体图谱用于将这些菌株分为两组(I组和II组),相似性为55%。通过使用引物208对RAPD图谱进行分析,基于45%或更高的同源性将14株菌株分为3组(A - C组),而使用引物272进行分析时,基于50%或更高的同源性有4组(A - D组)。还通过实验证实了这些分离株的耐氯性(99.9% 杀菌浓度时间值),并且我们试图确定耐氯性与基因簇之间的联系。I组的平均杀菌浓度时间值为0.89毫克·分钟/升,II组的平均值为0.69毫克·分钟/升。未发现各组之间杀菌浓度时间值有显著差异。

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