Faculty of Pharmacy, AIMST University, Kedah, Malaysia.
J Enzyme Inhib Med Chem. 2012 Oct;27(5):693-707. doi: 10.3109/14756366.2011.608664. Epub 2011 Oct 1.
A linear quantitative structure activity relationship (QSAR) model is presented for predicting human immunodeficiency virus-1 (HIV-1) reverse transcriptase enzyme inhibition. The 2D QSAR and 3D-QSAR models were developed by stepwise multiple linear regression, partial least square (PLS) regression and k-nearest neighbor-molecular field analysis, PLS regression, respectively using a database consisting of 33 recently discovered benzoxazinones. The primary findings of this study is that the number of hydrogen atoms, number of (-NH2) group connected with solitary single bond alters the inhibition of HIV-1 reverse transcriptase. Further, presence of electrostatic, hydrophobic and steric field descriptors significantly affects the ability of benzoxazinone derivatives to inhibit HIV-1 reverse transcriptase. The selected descriptors could serve as a primer for the design of novel and potent antagonists of HIV-1 reverse transcriptase.
本文提出了一个线性定量构效关系(QSAR)模型,用于预测人类免疫缺陷病毒-1(HIV-1)逆转录酶的抑制作用。该 2D-QSAR 和 3D-QSAR 模型分别使用由 33 个最近发现的苯并恶嗪酮组成的数据库,通过逐步多元线性回归、偏最小二乘(PLS)回归和 k-最近邻-分子场分析、PLS 回归进行了开发。本研究的主要发现是,与单键相连的氢原子数和(-NH2)基团数改变了 HIV-1 逆转录酶的抑制作用。此外,静电、疏水和立体场描述符的存在显著影响了苯并恶嗪酮衍生物抑制 HIV-1 逆转录酶的能力。所选描述符可以作为设计新型高效 HIV-1 逆转录酶拮抗剂的基础。