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利用 QSPR 模型来描述药物与肠道限制聚合物的体外结合。

Use of QSPR Modeling to Characterize In Vitro Binding of Drugs to a Gut-Restricted Polymer.

机构信息

Research Department, Relypsa, Inc., a Vifor Pharma Group Company, 100 Cardinal Way, Redwood City, California, 94063, USA.

Computational Chemistry Department, Array BioPharma Inc, Boulder, Colorado, USA.

出版信息

Pharm Res. 2018 Mar 8;35(4):89. doi: 10.1007/s11095-018-2356-y.

Abstract

PURPOSE

Polymeric drugs, including patiromer (Veltassa®), bind target molecules or ions in the gut, allowing fecal elimination. Non-absorbed insoluble polymers, like patiromer, avoid common systemic drug-drug interactions (DDIs). However, the potential for DDI via polymer binding to orally administered drugs during transit of the gastrointestinal tract remains. Here we elucidate the properties correlated with drug-patiromer binding using quantitative structure-property relationship (QSPR) models.

METHODS

We selected 28 drugs to evaluate for binding to patiromer in vitro over a range of pH and ionic conditions intended to mimic the gut environment. Using this in vitro data, we developed QSPR models using step-wise linear regression and analyzed over 100 physiochemical drug descriptors.

RESULTS

Four descriptors emerged that account for ~70% of patiromer-drug binding in vitro: the computed surface area of hydrogen bond accepting atoms, ionization potential, electron affinity, and lipophilicity (R  = 0.7, Q  = 0.6). Further, certain molecular properties are shared by nonbinding, weak, or strong binding compounds.

CONCLUSIONS

These findings offer insight into drivers of in vitro binding to patiromer and describe a useful approach for assessing potential drug-binding risk of investigational polymeric drugs.

摘要

目的

聚合物药物,包括帕替诺尔(Veltassa®),可在肠道中结合靶分子或离子,从而实现粪便排泄。像帕替诺尔这样的不被吸收的不可溶聚合物可避免常见的全身药物-药物相互作用(DDI)。然而,聚合物通过与胃肠道转运过程中口服药物的结合而发生药物相互作用的可能性仍然存在。在这里,我们使用定量构效关系(QSPR)模型阐明与帕替诺尔结合相关的性质。

方法

我们选择了 28 种药物,以评估在不同 pH 值和离子条件下与帕替诺尔在体外的结合情况,这些条件旨在模拟肠道环境。使用这些体外数据,我们使用逐步线性回归开发了 QSPR 模型,并分析了 100 多个生理化学药物描述符。

结果

有四个描述符可以解释约 70%的帕替诺尔与药物的体外结合:计算得到的氢键接受原子表面积、离化能、电子亲合能和亲脂性(R  = 0.7,Q  = 0.6)。此外,某些分子性质在非结合、弱结合或强结合化合物中是共享的。

结论

这些发现为理解帕替诺尔体外结合的驱动因素提供了深入的认识,并描述了一种评估研究性聚合物药物潜在药物结合风险的有用方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7407/5843698/b484d5495484/11095_2018_2356_Fig1_HTML.jpg

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