鉴定与代谢物 R(-)-2-羟基戊二酸产生相关的其他 IDH 突变。

Identification of additional IDH mutations associated with oncometabolite R(-)-2-hydroxyglutarate production.

机构信息

Cancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, New York, NY 10065, USA.

出版信息

Oncogene. 2012 May 10;31(19):2491-8. doi: 10.1038/onc.2011.416. Epub 2011 Sep 26.

Abstract

Mutations in cytosolic isocitrate dehydrogenase 1 (IDH1) or its mitochondrial homolog IDH2 can lead to R(-)-2-hydroxyglutarate (2HG) production. To date, mutations in three active site arginine residues, IDH1 R132, IDH2 R172 and IDH2 R140, have been shown to result in the neomorphic production of 2HG. Here we report on three additional 2HG-producing IDH1 mutations: IDH1 R100, which is affected in adult glioma, IDH1 G97, which is mutated in colon cancer cell lines and pediatric glioblastoma, and IDH1 Y139. All these new mutants stereospecifically produced 2HG's (R) enantiomer. In contrast, we find that the IDH1 SNPs V71I and V178I, as well as a number of other single-sample reports of IDH non-synonymous mutation, did not elevate cellular 2HG levels in cells and retained the wild-type ability for isocitrate-dependent NADPH production. Finally, we report the existence of additional rare, but recurring mutations found in lymphoma and thyroid cancer, which while failing to elevate 2HG nonetheless displayed loss of function, indicating a possible tumorigenic mechanism for a non-2HG-producing subset of IDH mutations in some malignancies. These data broaden our understanding of how IDH mutations may contribute to cancer through either neomorphic R(-)-2HG production or reduced wild-type enzymatic activity, and highlight the potential value of metabolite screening in identifying IDH-mutated tumors associated with elevated oncometabolite levels.

摘要

细胞质异柠檬酸脱氢酶 1(IDH1)或其线粒体同源物 IDH2 的突变可导致 R(-)-2-羟戊酸(2HG)的产生。迄今为止,已发现三个活性位点精氨酸残基 IDH1 R132、IDH2 R172 和 IDH2 R140 的突变会导致 2HG 的新表型产生。在这里,我们报告了另外三个产生 2HG 的 IDH1 突变:IDH1 R100,其在成人胶质瘤中受影响,IDH1 G97 在结肠癌细胞系和小儿脑胶质瘤中发生突变,以及 IDH1 Y139。所有这些新的突变体都立体特异性地产生了 2HG 的(R)对映异构体。相比之下,我们发现 IDH1 SNPs V71I 和 V178I 以及其他一些 IDH 非同义突变的单样本报告并没有在细胞中升高细胞 2HG 水平,并且保留了依赖异柠檬酸的 NADPH 产生的野生型能力。最后,我们报告了在淋巴瘤和甲状腺癌中发现的其他罕见但反复出现的突变,尽管这些突变没有升高 2HG,但显示出功能丧失,这表明在某些恶性肿瘤中,一些非产生 2HG 的 IDH 突变可能存在肿瘤发生机制。这些数据拓宽了我们对 IDH 突变如何通过新表型 R(-)-2HG 产生或降低野生型酶活性导致癌症的理解,并强调了代谢物筛选在识别与升高的致癌代谢物水平相关的 IDH 突变肿瘤方面的潜在价值。

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