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[利用傅里叶变换红外光谱法鉴定土壤传播真菌]

[Identification of soil-borne fungi using Fourier transform infrared spectroscopy].

作者信息

Chai A-Li, Li Bao-Ju, Shi Yan-Xia, Xie Xue-Wen

机构信息

Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China.

出版信息

Guang Pu Xue Yu Guang Pu Fen Xi. 2011 Aug;31(8):2094-7.

Abstract

Fourier transform infrared (FTIR) attenuated total reflectance (ATR) spectroscopy was used in combination with multivariate statistic analysis for identification of soil-borne fungi that causes severe economic damage to agriculture: Fusarium monili forme, Fusarium semitectum, Fusarium oxysporum, Fusarium solani, Rhizoctonia solani, Sclerotinia sclerotiorum, Pythium aphanidermatum and Phytophthora capsici. The original FTIR spectra were normalized, and the second derivatives were calculated, from which the peak wave numbers showing greatest variability were selected: 2924, 2854, 1745, 1641, 1547, 1466, 1406, 1376, 1306, 1240, 1201, 1152, 1109 and 1028 cm(-1). To discriminate different fungal strains, canonical discriminant analysis and cluster analysis were performed at these characteristic wave numbers. Results showed that the classification accuracies achieved 100% for different species of fungi, and classification accuracies for different fusarium strains achieved 95.56%, demonstrating the high potential of this technique for fungi identification.

摘要

傅里叶变换红外(FTIR)衰减全反射(ATR)光谱法与多元统计分析相结合,用于鉴定对农业造成严重经济损失的土传真菌:串珠镰刀菌、半裸镰刀菌、尖孢镰刀菌、茄腐镰刀菌、立枯丝核菌、核盘菌、瓜果腐霉和辣椒疫霉。对原始FTIR光谱进行归一化处理,并计算二阶导数,从中选择变异性最大的峰值波数:2924、2854、1745、1641、1547、1466、1406、1376、1306、1240、1201、1152、1109和1028 cm(-1)。为区分不同的真菌菌株,在这些特征波数下进行了典型判别分析和聚类分析。结果表明,不同真菌物种的分类准确率达到100%,不同镰刀菌菌株的分类准确率达到95.56%,证明了该技术在真菌鉴定方面的巨大潜力。

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