Trappl Krista, Polacek Norbert
Innsbruck Biocenter, Division of Genomics and RNomics, Medical University Innsbruck, Fritz-Pregl-Strasse 3, 6020 Innsbruck, Austria.
Met Ions Life Sci. 2011;9:253-75. doi: 10.1039/9781849732512-00253.
Metal ions are the salt in the soup of essentially every biological system. Also in the ribosome, the largest natural ribozyme that produces all proteins in every living cell, metal ions have been found contributing significantly to the highly dynamic and accurate process of translation. The ribosome is considered a molecular fossil of the 'RNA world' and it could be shown that the evolutionarily oldest parts of the particle, which build the catalytic center and surrounding domains, are densely packed with divalent metal ions. Nevertheless, metal ions do not seem to directly participate in ribosomal catalysis, their important roles in the ribosome, however, cannot be denied. It is probable that mono- and divalent metal ions primarily promote the functionally competent architecture of the ribosomal RNAs, but more direct roles in mRNA decoding and reading frame maintenance are likely. Decades of biochemical studies and the recent high resolution crystallographic structures of the ribosome strongly indicate that metal ions are involved in essentially every phase of the ribosomal elongation cycle, thus contributing significantly to the precise translation of the genetic code.
金属离子几乎存在于每一个生物系统的“汤”中,也就是盐中。同样在核糖体(在每个活细胞中产生所有蛋白质的最大天然核酶)中,人们发现金属离子对高度动态且精确的翻译过程有显著贡献。核糖体被认为是“RNA世界”的分子化石,并且可以证明,构成催化中心和周围结构域的颗粒中进化上最古老的部分,密集地堆积着二价金属离子。然而,金属离子似乎并不直接参与核糖体催化,不过它们在核糖体中的重要作用不可否认。单价和二价金属离子可能主要促进核糖体RNA的功能合适结构,但在mRNA解码和阅读框维持中可能有更直接的作用。数十年的生化研究以及核糖体最近的高分辨率晶体结构有力地表明,金属离子几乎参与核糖体延伸循环的每个阶段,从而对遗传密码的精确翻译有显著贡献。