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全基因组关联研究在德国注意缺陷多动障碍患者中。

Genome-wide association study in German patients with attention deficit/hyperactivity disorder.

机构信息

Department of Child and Adolescent Psychiatry, University of Duisburg-Essen, Essen, Germany.

出版信息

Am J Med Genet B Neuropsychiatr Genet. 2011 Dec;156B(8):888-97. doi: 10.1002/ajmg.b.31246. Epub 2011 Oct 19.

Abstract

The heritability of attention deficit hyperactivity disorder (ADHD) is approximately 0.8. Despite several larger scale attempts, genome-wide association studies (GWAS) have not led to the identification of significant results. We performed a GWAS based on 495 German young patients with ADHD (according to DSM-IV criteria; Human660W-Quadv1; Illumina, San Diego, CA) and on 1,300 population-based adult controls (HumanHap550v3; Illumina). Some genes neighboring the single nucleotide polymorphisms (SNPs) with the lowest P-values (best P-value: 8.38 × 10(-7)) have potential relevance for ADHD (e.g., glutamate receptor, metabotropic 5 gene, GRM5). After quality control, the 30 independent SNPs with the lowest P-values (P-values ≤ 7.57 × 10(-5) ) were chosen for confirmation. Genotyping of these SNPs in up to 320 independent German families comprising at least one child with ADHD revealed directionally consistent effect-size point estimates for 19 (10 not consistent) of the SNPs. In silico analyses of the 30 SNPs in the largest meta-analysis so far (2,064 trios, 896 cases, and 2,455 controls) revealed directionally consistent effect-size point estimates for 16 SNPs (11 not consistent). None of the combined analyses revealed a genome-wide significant result. SNPs in previously described autosomal candidate genes did not show significantly lower P-values compared to SNPs within random sets of genes of the same size. We did not find genome-wide significant results in a GWAS of German children with ADHD compared to controls. The second best SNP is located in an intron of GRM5, a gene located within a recently described region with an infrequent copy number variation in patients with ADHD.

摘要

注意缺陷多动障碍(ADHD)的遗传率约为 0.8。尽管进行了几次较大规模的尝试,但全基因组关联研究(GWAS)并未导致显著结果的发现。我们对 495 名德国年轻 ADHD 患者(根据 DSM-IV 标准;Human660W-Quadv1;Illumina,圣地亚哥,CA)和 1300 名基于人群的成年对照者(HumanHap550v3;Illumina)进行了 GWAS。一些紧邻最低 P 值(最佳 P 值:8.38×10(-7))的单核苷酸多态性(SNP)的基因可能与 ADHD 相关(例如,谷氨酸受体,代谢型 5 基因,GRM5)。经过质量控制,选择了 30 个具有最低 P 值(P 值≤7.57×10(-5))的独立 SNP 进行验证。在多达 320 个独立的德国家庭中对这些 SNP 进行基因分型,这些家庭至少有一个患有 ADHD 的孩子,结果显示其中 19 个(10 个不一致)的 SNP 具有一致的方向效应大小点估计值。在迄今为止最大的荟萃分析(2064 个三核苷酸重复,896 个病例和 2455 个对照)的 30 个 SNP 的计算机分析中,16 个 SNP 显示出一致的方向效应大小点估计值(11 个不一致)。在对德国 ADHD 儿童与对照组的联合分析中,均未发现全基因组显著结果。与相同大小的基因随机集的 SNP 相比,先前描述的常染色体候选基因中的 SNP 并未显示出显著更低的 P 值。与对照组相比,我们在对德国 ADHD 儿童的 GWAS 中未发现全基因组显著结果。排名第二的最佳 SNP 位于 GRM5 的内含子中,该基因位于最近描述的 ADHD 患者中罕见拷贝数变异的区域内。

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