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Assembly of preactivation complex for urease maturation in Helicobacter pylori: crystal structure of UreF-UreH protein complex.幽门螺杆菌脲酶成熟前激活复合物的组装:UreF-UreH 蛋白复合物的晶体结构。
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2
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3
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4
Structural insights into how GTP-dependent conformational changes in a metallochaperone UreG facilitate urease maturation.金属伴侣蛋白 UreG 中 GTP 依赖性构象变化促进脲酶成熟的结构见解。
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Helicobacter pylori hydrogenase accessory protein HypA and urease accessory protein UreG compete with each other for UreE recognition.幽门螺杆菌氢化酶辅助蛋白HypA和脲酶辅助蛋白UreG相互竞争以识别UreE。
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8
Analysis of a soluble (UreD:UreF:UreG)2 accessory protein complex and its interactions with Klebsiella aerogenes urease by mass spectrometry.通过质谱分析可溶性(UreD:UreF:UreG)2 辅助蛋白复合物及其与产气克雷伯氏菌脲酶的相互作用。
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9
Molecular landscape of the interaction between the urease accessory proteins UreE and UreG.脲酶辅助蛋白UreE与UreG相互作用的分子格局
Biochim Biophys Acta. 2014 Sep;1844(9):1662-74. doi: 10.1016/j.bbapap.2014.06.016. Epub 2014 Jun 27.
10
Nickel binding properties of Helicobacter pylori UreF, an accessory protein in the nickel-based activation of urease.幽门螺杆菌脲酶F(UreF)的镍结合特性,镍基脲酶激活中的一种辅助蛋白。
J Biol Inorg Chem. 2014 Mar;19(3):319-34. doi: 10.1007/s00775-013-1068-3. Epub 2013 Nov 30.

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本文引用的文献

1
Crystal structure of a truncated urease accessory protein UreF from Helicobacter pylori.幽门螺杆菌截短脲酶辅助蛋白 UreF 的晶体结构。
Proteins. 2010 Oct;78(13):2839-48. doi: 10.1002/prot.22802.
2
Mutagenesis of Klebsiella aerogenes UreG to probe nickel binding and interactions with other urease-related proteins.将肺炎克雷伯氏菌 UreG 进行诱变以研究镍结合及其与其他脲酶相关蛋白的相互作用。
Biochemistry. 2010 Jul 20;49(28):5859-69. doi: 10.1021/bi1004987.
3
Crystal structure of the first plant urease from jack bean: 83 years of journey from its first crystal to molecular structure.首株刀豆脲酶的晶体结构:从首次结晶到分子结构的 83 年探索历程。
J Mol Biol. 2010 Jul 16;400(3):274-83. doi: 10.1016/j.jmb.2010.05.009. Epub 2010 May 13.
4
Features and development of Coot.Coot的特点与发展
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. doi: 10.1107/S0907444910007493. Epub 2010 Mar 24.
5
Characterization of the Klebsiella aerogenes urease accessory protein UreD in fusion with the maltose binding protein.与麦芽糖结合蛋白融合的产气克雷伯氏菌脲酶辅助蛋白 UreD 的特性。
J Bacteriol. 2010 May;192(9):2294-304. doi: 10.1128/JB.01426-09. Epub 2010 Mar 5.
6
PHENIX: a comprehensive Python-based system for macromolecular structure solution.PHENIX:一个基于Python的用于大分子结构解析的综合系统。
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. doi: 10.1107/S0907444909052925. Epub 2010 Jan 22.
7
XDS.XDS.(这个词如果没有更多背景信息,很难准确翻译出更有意义的内容,直接保留原文是一种处理方式,或者音译为“克斯达斯”之类,但感觉都不太符合常规翻译场景,你可以补充更多关于这个词的信息以便我更准确翻译 )
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32. doi: 10.1107/S0907444909047337. Epub 2010 Jan 22.
8
MolProbity: all-atom structure validation for macromolecular crystallography.MolProbity:用于大分子晶体学的全原子结构验证
Acta Crystallogr D Biol Crystallogr. 2010 Jan;66(Pt 1):12-21. doi: 10.1107/S0907444909042073. Epub 2009 Dec 21.
9
Interplay of metal ions and urease.金属离子与脲酶的相互作用。
Metallomics. 2009;1(3):207-21. doi: 10.1039/b903311d.
10
Helicobacter pylori UreE, a urease accessory protein: specific Ni(2+)- and Zn(2+)-binding properties and interaction with its cognate UreG.幽门螺杆菌脲酶辅助蛋白UreE:特定的镍离子(Ni²⁺)和锌离子(Zn²⁺)结合特性及其与同源蛋白UreG的相互作用
Biochem J. 2009 Jul 29;422(1):91-100. doi: 10.1042/BJ20090434.

幽门螺杆菌脲酶成熟前激活复合物的组装:UreF-UreH 蛋白复合物的晶体结构。

Assembly of preactivation complex for urease maturation in Helicobacter pylori: crystal structure of UreF-UreH protein complex.

机构信息

Centre for Protein Science and Crystallography, School of Life Sciences, Chinese University of Hong Kong, China, Hong Kong.

出版信息

J Biol Chem. 2011 Dec 16;286(50):43241-9. doi: 10.1074/jbc.M111.296830. Epub 2011 Oct 19.

DOI:10.1074/jbc.M111.296830
PMID:22013070
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3234868/
Abstract

Colonization of Helicobacter pylori in the acidic environment of the human stomach depends on the neutralizing activity of urease. Activation of apo-urease involves carboxylation of lysine 219 and insertion of two nickel ions. In H. pylori, this maturation process involves four urease accessory proteins as follows: UreE, UreF, UreG, and UreH. It is postulated that the apo-urease interacts with UreF, UreG, and UreH to form a pre-activation complex that undergoes GTP-dependent activation of urease. The crystal structure of the UreF-UreH complex reveals conformational changes in two distinct regions of UreF upon complex formation. First, the flexible C-terminal residues of UreF become ordered, forming an extra helix α10 and a loop structure stabilized by hydrogen bonds involving Arg-250. Second, the first turn of helix α2 uncoils to expose a conserved residue, Tyr-48. Substitution of R250A or Y48A in UreF abolishes the formation of the heterotrimeric complex of UreG-UreF-UreH and abolishes urease maturation. Our results suggest that the C-terminal residues and helix α2 of UreF are essential for the recruitment of UreG for the formation of the pre-activation complex. The molecular mass of the UreF-UreH complex determined by static light scattering was 116 ± 2.3 kDa, which is consistent with the quaternary structure of a dimer of heterodimers observed in the crystal structure. Taking advantage of the unique 2-fold symmetry observed in both the crystal structures of H. pylori urease and the UreF-UreH complex, we proposed a topology model of the pre-activation complex for urease maturation.

摘要

幽门螺杆菌在人体胃部的酸性环境中的定植依赖于脲酶的中和活性。脱辅基脲酶的激活涉及赖氨酸 219 的羧化和两个镍离子的插入。在幽门螺杆菌中,这个成熟过程涉及四个脲酶辅助蛋白,分别是 UreE、UreF、UreG 和 UreH。据推测,脱辅基脲酶与 UreF、UreG 和 UreH 相互作用,形成一个预激活复合物,该复合物经历 GTP 依赖性的脲酶激活。UreF-UreH 复合物的晶体结构揭示了 UreF 中两个不同区域在形成复合物时的构象变化。首先,UreF 的柔性 C 端残基变得有序,形成一个额外的α10 螺旋和一个由涉及 Arg-250 的氢键稳定的环结构。其次,α2 螺旋的第一圈解开,暴露出一个保守的残基 Tyr-48。UreF 中的 R250A 或 Y48A 取代会破坏 UreG-UreF-UreH 异三聚体复合物的形成,并阻止脲酶成熟。我们的结果表明,UreF 的 C 端残基和α2 螺旋对于 UreG 的招募形成预激活复合物是必不可少的。静态光散射法测定的 UreF-UreH 复合物的分子量为 116 ± 2.3 kDa,与晶体结构中观察到的异二聚体二聚体的四聚体结构一致。利用我们在幽门螺杆菌脲酶和 UreF-UreH 复合物的晶体结构中观察到的独特的 2 倍对称性,我们提出了一个脲酶成熟的预激活复合物的拓扑模型。