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利用来自未知和基因丰富基因组区域的微卫星标记,研究金头鲷 Sparus aurata 的杂合度-适合度相关性。

Heterozygosity-fitness correlations in the gilthead sea bream Sparus aurata using microsatellite loci from unknown and gene-rich genomic locations.

机构信息

Laboratorio de Genética Acuícola, Departamento de Biología Funcional, Universidad de Oviedo, IUBA, 33071 Oviedo, Spain.

出版信息

J Fish Biol. 2011 Nov;79(5):1111-29. doi: 10.1111/j.1095-8649.2011.03099.x. Epub 2011 Sep 26.

Abstract

Heterozygosity-fitness correlations (HFC) were assessed for a sample of a gilthead sea bream Sparus aurata population. Two hundred and seventy-one fish were genotyped at 22 known and novel microsatellite loci, from which correlations between the multilocus heterozygosity index (I(MLH) ) and various fitness traits (fork length, mass and specific growth rates) were calculated. Significant global HFCs were found in this sample (0·02 ≤r(2) ≤ 0·08). In addition, all the significant correlations found in this work were negative, indicating that heterozygotes had lower fitness than their homozygote counterparts. Marker location could not explain the observed HFCs. Evidence of inbreeding, outbreeding or population and family structuring was not found in this work. The presence of undetected general effects that may lead to the appearance of HFCs, however, cannot be ruled out. These results seem to be best explained by the occurrence of local effects (due to linkage) or even by possible direct locus advantages.

摘要

对一批金头鲷(Sparus aurata)群体进行了杂合度-适合度相关(HFC)评估。从 22 个已知和新的微卫星基因座对 271 条鱼进行了基因分型,计算了多基因座杂合度指数(I(MLH))与各种适合度特征(叉长、质量和特定生长率)之间的相关性。在该样本中发现了显著的全局 HFC(0.02≤r(2)≤0.08)。此外,本工作中发现的所有显著相关性均为负相关,表明杂合体的适合度低于其纯合体。标记位置不能解释观察到的 HFC。本研究未发现近亲繁殖、远缘繁殖或种群和家族结构。然而,不能排除可能存在未检测到的一般效应,这些效应可能导致 HFC 的出现。这些结果似乎最好用局部效应(由于连锁)甚至可能的直接基因座优势来解释。

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