Biomedical Translational Research Center, Division of Convergent Biomedical Research, Korea Research Institute of Bioscience and Biotechnology, 125 Gwahak-ro, Yuseong-gu, Daejeon, 305-806 Korea.
Curr Protein Pept Sci. 2012 Feb;13(1):34-54. doi: 10.2174/138920312799277974.
Intrinsically unfolded proteins (IUPs) do not obey the golden rule of structural biology, 3D structure = function, as they manifest their inherent functions without resorting to three-dimensional structures. Absence of a compact globular topology in these proteins strongly implies that their ligand recognition processes should involve factors other than spatially well-defined binding pockets. Heteronuclear multidimensional (HetMulD) NMR spectroscopy assisted with a stable isotope labeling technology is a powerful tool for quantitatively investigating detailed structural features in IUPs. In particular, it allows us to delineate the presence and locations of pre-structured motifs (PreSMos) on a per-residue basis. PreSMos are the transient local structural elements that presage target-bound conformations and act as specificity determinants for IUP recognition by target proteins. Here, we present a brief chronicle of HetMulD NMR studies on IUPs carried out over the past two decades along with a discussion on the functional significance of PreSMos in IUPs.
无规卷曲蛋白质(IUPs)不遵循结构生物学的黄金法则,即三维结构=功能,因为它们在不依赖三维结构的情况下表现出其固有功能。这些蛋白质中没有紧凑的球状拓扑结构强烈表明,它们的配体识别过程应该涉及除空间上定义明确的结合口袋之外的因素。异核多维(HetMulD)NMR 光谱结合稳定同位素标记技术是定量研究 IUP 详细结构特征的有力工具。特别是,它使我们能够在每个残基的基础上描绘预结构化模体(PreSMos)的存在和位置。PreSMos 是预示靶结合构象的瞬态局部结构元素,并且作为 IUP 被靶蛋白识别的特异性决定因素。在这里,我们简要介绍了过去二十年中进行的关于 IUP 的 HetMulD NMR 研究,并讨论了 PreSMos 在 IUP 中的功能意义。