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肠球菌属河流亚种,源自原始溪流水体。

Enterococcus rivorum sp. nov., from water of pristine brooks.

机构信息

Finnish Environment Institute, Ecosystem Change, PO Box 140, FI-00251 Helsinki, Finland.

Institute of Biotechnology, University of Helsinki, PO Box 56, FI-00014 Helsinki, Finland.

出版信息

Int J Syst Evol Microbiol. 2012 Sep;62(Pt 9):2169-2173. doi: 10.1099/ijs.0.038257-0. Epub 2011 Nov 4.

DOI:10.1099/ijs.0.038257-0
PMID:22058322
Abstract

A significant number of Enterococcus strains from pristine waters of two brooks in Finland formed a distinct cluster on the basis of whole-cell protein fingerprinting by one-dimensional SDS-PAGE. The strains shared the following characteristics. Cells were ovoid, Gram-positive-staining and non-spore-forming, appearing singly or in pairs or chains. They were facultatively anaerobic and catalase-negative. Growth in broth containing 6.5 % NaCl or at 45 °C was weak or absent. Production of D antigen was variable. The strains tolerated 60 °C for 30 min, 40 % bile and tellurite, hydrolysed aesculin strongly and gelatin weakly, produced no acid from hippurate and did not reduce it, grew weakly at 10 °C, showed a strong reaction for the Voges-Proskauer test and produced acid from methyl α-d-glucoside, mannitol, sorbitol and sucrose, with weak or no production of acid from methyl α-d-mannoside, l-arabinose, gluconate and l-xylose. Several of the strains were selected for identification on the basis of sequencing of almost the whole 16S rRNA gene and partial atpA and pheS genes and of (GTG)(5)-PCR fingerprints. Partial atpA and pheS gene sequencing was also performed for those type strains of Enterococcus species without available sequences in the database. The pristine brook isolates formed a novel species, for which the name Enterococcus rivorum sp. nov. (type strain S299(T) = HAMBI 3055(T) = LMG 25899(T) = CCM 7986(T)) is proposed. On the basis of 16S rRNA gene sequence similarity, E. rivorum sp. nov. is related to the Enterococcus faecalis genogoup. It is distinguished from described Enterococcus species on the basis of 16S rRNA, atpA and pheS gene sequences and whole-cell protein and (GTG)(5)-PCR fingerprints. It is most closely related to E. faecalis, but DNA-DNA hybridization confirms it to represent a novel species.

摘要

从芬兰两条溪流的原始水中分离出的大量肠球菌菌株,通过一维 SDS-PAGE 全细胞蛋白指纹图谱分析,形成了一个独特的聚类。这些菌株具有以下特征:细胞呈卵形,革兰氏阳性染色,不形成孢子,呈单个、成对或链状出现。它们是兼性厌氧菌,过氧化氢酶阴性。在含有 6.5%NaCl 的肉汤或 45°C 下生长微弱或不存在。D 抗原的产生是可变的。这些菌株耐受 60°C 30 分钟,40%胆汁和碲酸盐,强烈水解马栗树皮苷,弱水解明胶,不产酸从 hippurate 且不还原它,在 10°C 下生长微弱,对 Voges-Proskauer 试验呈强反应,产酸从甲基α-d-葡萄糖苷、甘露醇、山梨醇和蔗糖,甲基α-d-甘露糖苷、阿拉伯糖、葡萄糖酸盐和木糖产酸微弱或不存在。根据几乎整个 16S rRNA 基因和部分 atpA 和 pheS 基因以及(GTG)(5)-PCR 指纹图谱的测序,选择了一些菌株进行鉴定。对于数据库中没有可用序列的肠球菌属的那些模式菌株,也进行了部分 atpA 和 pheS 基因测序。原始溪流分离株形成了一个新种,命名为肠球菌 rivorum sp. nov.(模式株 S299(T)=HAMBI 3055(T)=LMG 25899(T)=CCM 7986(T))。根据 16S rRNA 基因序列相似性,E.rivorum sp. nov. 与肠球菌 faecalis 基因群有关。它与描述的肠球菌种在 16S rRNA、atpA 和 pheS 基因序列以及全细胞蛋白和(GTG)(5)-PCR 指纹图谱上有所区别。它与 E. faecalis 最为密切相关,但 DNA-DNA 杂交证实它代表了一个新种。

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