• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

哺乳动物DNA聚合酶β催化结构域的鉴定与特性

Identification and properties of the catalytic domain of mammalian DNA polymerase beta.

作者信息

Kumar A, Abbotts J, Karawya E M, Wilson S H

机构信息

Laboratory of Biochemistry, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892.

出版信息

Biochemistry. 1990 Aug 7;29(31):7156-9. doi: 10.1021/bi00483a002.

DOI:10.1021/bi00483a002
PMID:2207097
Abstract

Rat DNA polymerase beta (beta-pol) is a 39-kDa protein organized in two tightly folded domains, 8-kDa N-terminal and 31-kDa C-terminal domains, connected by a short protease-sensitive region. The 8-kDa domain contributes template binding to the intact protein, and we now report that the 31-kDa C-terminal domain contributes catalytic activity. Our results show that this domain as a purified proteolytic fragment conducts DNA synthesis under appropriate conditions but the kcat is lower and primer extension properties are different from those of the intact enzyme. A proteolytic truncation of the 31-kDa catalytic domain fragment, to remove a 60-residue segment from the NH2-terminal end, results in nearly complete loss of activity, suggesting the importance of this segment. Overall, these results indicate that the domains of beta-pol have distinct functional roles, template binding and nucleotidyltransferase, respectively; yet, the intact protein is more active for each function than the isolated individual domain fragment.

摘要

大鼠DNA聚合酶β(β-pol)是一种39 kDa的蛋白质,由两个紧密折叠的结构域组成,即8 kDa的N端结构域和31 kDa的C端结构域,通过一个短的蛋白酶敏感区域相连。8 kDa结构域有助于完整蛋白质与模板结合,我们现在报道31 kDa的C端结构域具有催化活性。我们的结果表明,该结构域作为纯化的蛋白水解片段,在适当条件下进行DNA合成,但其催化常数较低,引物延伸特性与完整酶不同。对31 kDa催化结构域片段进行蛋白水解截短,从NH2末端去除一个60个残基的片段,导致活性几乎完全丧失,表明该片段的重要性。总体而言,这些结果表明β-pol的结构域分别具有不同的功能作用,即模板结合和核苷酸转移酶活性;然而,完整蛋白质在每种功能上比分离的单个结构域片段更具活性。

相似文献

1
Identification and properties of the catalytic domain of mammalian DNA polymerase beta.哺乳动物DNA聚合酶β催化结构域的鉴定与特性
Biochemistry. 1990 Aug 7;29(31):7156-9. doi: 10.1021/bi00483a002.
2
Crystal structures of human DNA polymerase beta complexed with DNA: implications for catalytic mechanism, processivity, and fidelity.与DNA复合的人类DNA聚合酶β的晶体结构:对催化机制、持续合成能力和保真度的影响
Biochemistry. 1996 Oct 1;35(39):12742-61. doi: 10.1021/bi952955d.
3
Identification of residues in the single-stranded DNA-binding site of the 8-kDa domain of rat DNA polymerase beta by UV cross-linking.通过紫外线交联鉴定大鼠DNA聚合酶β 8 kDa结构域单链DNA结合位点中的残基
J Biol Chem. 1993 Oct 25;268(30):22746-55.
4
Specific inhibition of DNA polymerase beta by its 14 kDa domain: role of single- and double-stranded DNA binding and 5'-phosphate recognition.DNA聚合酶β的14 kDa结构域对其的特异性抑制作用:单链和双链DNA结合及5'-磷酸识别的作用
Nucleic Acids Res. 1995 May 11;23(9):1597-603. doi: 10.1093/nar/23.9.1597.
5
Mammalian DNA polymerase beta: characterization of a 16-kDa transdomain fragment containing the nucleic acid-binding activities of the native enzyme.哺乳动物DNA聚合酶β:对一个包含天然酶核酸结合活性的16 kDa跨结构域片段的表征。
Biochemistry. 1992 Oct 27;31(42):10272-80. doi: 10.1021/bi00157a014.
6
Three-dimensional solution structure of the N-terminal domain of DNA polymerase beta and mapping of the ssDNA interaction interface.DNA聚合酶β N端结构域的三维溶液结构及单链DNA相互作用界面的定位
Biochemistry. 1996 May 21;35(20):6188-200. doi: 10.1021/bi952656o.
7
Studies of the domain structure of mammalian DNA polymerase beta. Identification of a discrete template binding domain.
J Biol Chem. 1990 Feb 5;265(4):2124-31.
8
Structure of DNA polymerase I Klenow fragment bound to duplex DNA.与双链DNA结合的DNA聚合酶I Klenow片段的结构。
Science. 1993 Apr 16;260(5106):352-5. doi: 10.1126/science.8469987.
9
dNTP binding site in rat DNA polymerase beta revealed by controlled proteolysis and azido photoprobe cross-linking.通过可控蛋白水解和叠氮光探针交联揭示大鼠DNA聚合酶β中的dNTP结合位点。
Biochemistry. 1996 Mar 26;35(12):3728-34. doi: 10.1021/bi952632h.
10
The inhibitory effect of novel triterpenoid compounds, fomitellic acids, on DNA polymerase beta.新型三萜类化合物——云芝酸对DNA聚合酶β的抑制作用。
Biochem J. 1998 Mar 15;330 ( Pt 3)(Pt 3):1325-32. doi: 10.1042/bj3301325.

引用本文的文献

1
RNA-guided DNA base damage repair via DNA polymerase-mediated nick translation.通过 DNA 聚合酶介导的缺口平移修复 RNA 引导的 DNA 碱基损伤。
Nucleic Acids Res. 2023 Jan 11;51(1):166-181. doi: 10.1093/nar/gkac1178.
2
The splicing component ISY1 regulates APE1 in base excision repair.拼接元件 ISY1 调节碱基切除修复中的 APE1。
DNA Repair (Amst). 2020 Feb;86:102769. doi: 10.1016/j.dnarep.2019.102769. Epub 2019 Dec 13.
3
The Pol β variant containing exon α is deficient in DNA polymerase but has full dRP lyase activity.含有外显子α的 Pol β 变体缺乏 DNA 聚合酶活性,但具有完整的 dRP 核酸内切酶活性。
Sci Rep. 2019 Jul 9;9(1):9928. doi: 10.1038/s41598-019-45846-0.
4
DNA polymerase β uses its lyase domain in a processive search for DNA damage.DNA聚合酶β在持续搜索DNA损伤的过程中使用其裂解酶结构域。
Nucleic Acids Res. 2017 Apr 20;45(7):3822-3832. doi: 10.1093/nar/gkx047.
5
Mammalian Base Excision Repair: Functional Partnership between PARP-1 and APE1 in AP-Site Repair.哺乳动物碱基切除修复:PARP-1与APE1在AP位点修复中的功能协作关系。
PLoS One. 2015 May 28;10(5):e0124269. doi: 10.1371/journal.pone.0124269. eCollection 2015.
6
Role of polymerase β in complementing aprataxin deficiency during abasic-site base excision repair.聚合酶β在碱基切除修复中弥补无碱基位点缺陷时的作用。
Nat Struct Mol Biol. 2014 May;21(5):497-9. doi: 10.1038/nsmb.2818. Epub 2014 Apr 28.
7
Identification of one of the apurinic/apyrimidinic lyase active sites of topoisomerase V by structural and functional studies.通过结构和功能研究鉴定拓扑异构酶 V 的无嘌呤/无嘧啶核酸内切酶活性位点之一。
Nucleic Acids Res. 2013 Jan 7;41(1):657-66. doi: 10.1093/nar/gks1017. Epub 2012 Nov 3.
8
Base excision repair: contribution to tumorigenesis and target in anticancer treatment paradigms.碱基切除修复:在肿瘤发生中的作用和在抗癌治疗模式中的靶点。
Curr Med Chem. 2012;19(23):3922-36. doi: 10.2174/092986712802002581.
9
A review of recent experiments on step-to-step "hand-off" of the DNA intermediates in mammalian base excision repair pathways.对哺乳动物碱基切除修复途径中DNA中间体逐步“交接”的近期实验综述。
Mol Biol (Mosk). 2011 Jul-Aug;45(4):586-600.
10
Substrate channeling in mammalian base excision repair pathways: passing the baton.哺乳动物碱基切除修复途径中的底物通道化:传递接力棒。
J Biol Chem. 2010 Dec 24;285(52):40479-88. doi: 10.1074/jbc.M110.155267. Epub 2010 Oct 14.