Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland.
FEMS Yeast Res. 2012 Mar;12(2):104-17. doi: 10.1111/j.1567-1364.2011.00765.x. Epub 2011 Dec 22.
Regulation of the flow of mass and energy through cellular metabolic networks is fundamental to the operation of all living organisms. Such metabolic fluxes are determined by the concentration of limiting substrates and by the amount and kinetic properties of the enzymes. Regulation of the amount of enzyme can be exerted, on a long-term scale, at the level of gene and protein expression. Enzyme regulation by post-translational modifications (PTMs) and noncovalent binding of allosteric effectors are shorter-term mechanisms that modulate enzyme activity. PTMs, in particular protein phosphorylation, are increasingly being recognized as key regulators in many cellular processes, including metabolism. For example, about half of the enzymes in the Saccharomyces cerevisiae metabolic network have been detected as phosphoproteins, although functional relevance has been demonstrated only in a few cases. Direct regulation of enzymes by PTMs provides one of the fastest ways for cells to adjust to environmental cues and internal stimulus. This review charts the so far identified metabolic enzymes undergoing reversible PTMs in the model eukaryote S. cerevisiae and reviews their underlying mechanistic principles - both at the individual enzyme level and in the context of the entire metabolic network operation.
细胞代谢网络中物质和能量流动的调节是所有生物运作的基础。这种代谢通量由限制底物的浓度以及酶的数量和动力学特性决定。酶数量的调节可以在基因和蛋白质表达的长期水平上进行。通过翻译后修饰(PTMs)和变构效应物的非共价结合进行酶调节是调节酶活性的短期机制。PTMs,特别是蛋白质磷酸化,越来越被认为是许多细胞过程(包括代谢)的关键调节剂。例如,在酿酒酵母代谢网络中,大约有一半的酶被检测为磷酸化蛋白,尽管仅在少数情况下证明了其功能相关性。PTMs 对酶的直接调节为细胞提供了一种最快的方式来适应环境线索和内部刺激。这篇综述描述了在模式真核生物酿酒酵母中经历可逆 PTM 的迄今为止已确定的代谢酶,并回顾了它们的潜在机制原理——既在单个酶水平上,也在整个代谢网络运作的背景下。