Institute of Bioanalytical Chemistry, Center for Biotechnology and Biomedicine, University of Leipzig, D-04103 Leipzig, Germany.
J Biol Chem. 2012 Jan 27;287(5):3051-66. doi: 10.1074/jbc.M111.294348. Epub 2011 Nov 30.
The intracellular parasite Toxoplasma gondii produces two nucleoside triphosphate diphosphohydrolases (NTPDase1 and -3). These tetrameric, cysteine-rich enzymes require activation by reductive cleavage of a hitherto unknown disulfide bond. Despite a 97% sequence identity, both isozymes differ largely in their ability to hydrolyze ATP and ADP. Here, we present crystal structures of inactive NTPDase3 as an apo form and in complex with the product AMP to resolutions of 2.0 and 2.2 Å, respectively. We find that the enzyme is present in an open conformation that precludes productive substrate binding and catalysis. The cysteine bridge 258-268 is identified to be responsible for locking of activity. Crystal structures of constitutively active variants of NTPDase1 and -3 generated by mutation of Cys(258)-Cys(268) show that opening of the regulatory cysteine bridge induces a pronounced contraction of the whole tetramer. This is accompanied by a 12° domain closure motion resulting in the correct arrangement of all active site residues. A complex structure of activated NTPDase3 with a non-hydrolyzable ATP analog and the cofactor Mg(2+) to a resolution of 2.85 Å indicates that catalytic differences between the NTPDases are primarily dictated by differences in positioning of the adenine base caused by substitution of Arg(492) and Glu(493) in NTPDase1 by glycines in NTPDase3.
细胞内寄生虫刚地弓形虫产生两种核苷三磷酸二磷酸水解酶(NTPDase1 和 -3)。这些四聚体、富含半胱氨酸的酶需要通过还原裂解一个未知的二硫键来激活。尽管序列同一性为 97%,但两种同工酶在水解 ATP 和 ADP 的能力上有很大差异。在这里,我们展示了非活性 NTPDase3 的晶体结构,分别为apo 形式和与产物 AMP 复合物,分辨率分别为 2.0 和 2.2 Å。我们发现该酶处于开放构象,无法进行有效的底物结合和催化。确定 258-268 位半胱氨酸桥负责锁定活性。通过突变 Cys(258)-Cys(268)生成的 NTPDase1 和 -3 的组成型活性变体的晶体结构表明,调节半胱氨酸桥的打开诱导整个四聚体的明显收缩。这伴随着 12°的结构域关闭运动,导致所有活性位点残基的正确排列。与非水解 ATP 类似物和辅助因子 Mg(2+)的活性 NTPDase3 的复合物结构,分辨率为 2.85 Å,表明 NTPDases 之间的催化差异主要由 NTPDase1 中的精氨酸(492)和谷氨酸(493)被甘氨酸取代导致腺嘌呤碱基定位的差异决定。