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分别为人病原体淋病奈瑟菌的 L-胱氨酸和 L-半胱氨酸的两种溶质受体的晶体结构。

Crystal structures of two solute receptors for L-cystine and L-cysteine, respectively, of the human pathogen Neisseria gonorrhoeae.

机构信息

Institut fuer Chemie und Biochemie/Kristallographie, Freie Universitaet Berlin, Takustrasse 6, D-14195 Berlin, Germany.

出版信息

J Mol Biol. 2012 Jan 20;415(3):560-72. doi: 10.1016/j.jmb.2011.11.030. Epub 2011 Nov 23.

DOI:10.1016/j.jmb.2011.11.030
PMID:22138345
Abstract

ATP-binding cassette (ABC) transporters are integral membrane proteins that carry a variety of substrates across biological membranes at the expense of ATP. The here considered prokaryotic canonical importers consist of three entities: an extracellular solute receptor, two membrane-intrinsic proteins forming a translocation pathway, and two cytoplasmic ATP-binding subunits. The ngo0372-74 and ngo2011-14 gene clusters from the human pathogen Neisseria gonorrhoeae were predicted by sequence homology as ABC transporters for the uptake of cystine and cysteine, respectively, and chosen for structural characterization. The structure of the receptor component Ngo0372 was obtained in a ligand-free "open" conformation and in a "closed" conformation when co-crystallized with L-cystine. Our data provide the first structural information of an L-cystine ABC transporter. Dissociation constants of 21 and 33 nM for L-cystine and L-selenocystine, respectively, were determined by isothermal titration calorimetry. In contrast, L-cystathionine and L-djenkolic acid are weak binders, while no binding was detectable for S-methyl-L-cysteine. Mutational analysis of two residues from the binding pocket, Trp97 and Tyr59, revealed that the latter is crucial for L-cystine binding. The structure of the Ngo2014 receptor was obtained in closed conformation in complex with co-purified L-cysteine. The protein binds L-cysteine with a K(d) of 26 nM. Comparison of the structures of both receptors and analysis of the ligand binding sites shed light on the mode of ligand recognition and provides insight into the tight binding of both substrates. Moreover, since L-cystine limitation leads to reduction in virulence of N. gonorrhoeae, Ngo0372 might be suited as target for an antimicrobial vaccine.

摘要

三磷酸腺苷结合盒(ABC)转运蛋白是一种整合膜蛋白,能够以三磷酸腺苷为代价将各种底物穿过生物膜。这里考虑的原核典型的输入蛋白由三个实体组成:细胞外溶质受体、两个形成转运途径的膜内在蛋白和两个细胞质 ATP 结合亚基。人类病原体淋病奈瑟菌的 ngo0372-74 和 ngo2011-14 基因簇通过序列同源性预测为 ABC 转运蛋白,分别用于胱氨酸和半胱氨酸的摄取,并选择进行结构特征分析。受体成分 Ngo0372 的结构在配体自由的“开放”构象和与 L-胱氨酸共结晶时的“封闭”构象中获得。我们的数据提供了第一个 L-胱氨酸 ABC 转运蛋白的结构信息。通过等温滴定量热法分别确定了 21 和 33 nM 的 L-胱氨酸和 L-硒代半胱氨酸的解离常数。相比之下,L-胱硫醚和 L-德扬科利酸是弱结合物,而 S-甲基-L-半胱氨酸则无法检测到结合。结合口袋中的两个残基(Trp97 和 Tyr59)的突变分析表明,后者对半胱氨酸的结合至关重要。Ngo2014 受体的结构在与共纯化的 L-半胱氨酸复合物中以封闭构象获得。该蛋白与 L-半胱氨酸的 K(d)值为 26 nM。比较两种受体的结构并分析配体结合位点,揭示了配体识别的模式,并深入了解了两种底物的紧密结合。此外,由于 L-胱氨酸的限制导致淋病奈瑟菌毒力降低,因此 Ngo0372 可能适合作为抗菌疫苗的靶标。

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