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利用序列比对将 GPS 和旅行日记数据联系起来,研究儿童的独立流动性。

Linking GPS and travel diary data using sequence alignment in a study of children's independent mobility.

机构信息

SHORE and Whariki Research Centre, School of Public Health, Massey University, Auckland, New Zealand.

出版信息

Int J Health Geogr. 2011 Dec 5;10:64. doi: 10.1186/1476-072X-10-64.

Abstract

BACKGROUND

Global positioning systems (GPS) are increasingly being used in health research to determine the location of study participants. Combining GPS data with data collected via travel/activity diaries allows researchers to assess where people travel in conjunction with data about trip purpose and accompaniment. However, linking GPS and diary data is problematic and to date the only method has been to match the two datasets manually, which is time consuming and unlikely to be practical for larger data sets. This paper assesses the feasibility of a new sequence alignment method of linking GPS and travel diary data in comparison with the manual matching method.

METHODS

GPS and travel diary data obtained from a study of children's independent mobility were linked using sequence alignment algorithms to test the proof of concept. Travel diaries were assessed for quality by counting the number of errors and inconsistencies in each participant's set of diaries. The success of the sequence alignment method was compared for higher versus lower quality travel diaries, and for accompanied versus unaccompanied trips. Time taken and percentage of trips matched were compared for the sequence alignment method and the manual method.

RESULTS

The sequence alignment method matched 61.9% of all trips. Higher quality travel diaries were associated with higher match rates in both the sequence alignment and manual matching methods. The sequence alignment method performed almost as well as the manual method and was an order of magnitude faster. However, the sequence alignment method was less successful at fully matching trips and at matching unaccompanied trips.

CONCLUSIONS

Sequence alignment is a promising method of linking GPS and travel diary data in large population datasets, especially if limitations in the trip detection algorithm are addressed.

摘要

背景

全球定位系统(GPS)越来越多地被用于健康研究中,以确定研究参与者的位置。将 GPS 数据与通过旅行/活动日记收集的数据相结合,使研究人员能够评估人们在何处旅行,并结合有关旅行目的和陪同人员的数据进行评估。但是,将 GPS 和日记数据进行链接存在问题,迄今为止,唯一的方法是手动匹配这两个数据集,这既费时又不太可能适用于更大的数据集。本文评估了一种新的序列比对方法将 GPS 和旅行日记数据进行链接的可行性,并与手动匹配方法进行了比较。

方法

使用序列比对算法将从儿童独立出行研究中获得的 GPS 和旅行日记数据进行链接,以测试概念验证。通过计算每个参与者的日记集中的错误和不一致的数量来评估旅行日记的质量。对于高质量和低质量的旅行日记,对于有陪同和无陪同的旅行,比较了序列比对方法和手动方法的成功率。对于序列比对方法和手动方法,比较了所需的时间和匹配的旅行比例。

结果

序列比对方法匹配了所有旅行的 61.9%。高质量的旅行日记与序列比对和手动匹配方法中的更高匹配率相关。序列比对方法的性能几乎与手动方法一样好,并且速度快一个数量级。但是,序列比对方法在完全匹配旅行和匹配无陪同旅行方面的效果较差。

结论

序列比对是一种将 GPS 和旅行日记数据链接到大型人群数据集中的很有前途的方法,特别是如果解决了旅行检测算法的局限性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82b4/3248843/a0839b49a1e3/1476-072X-10-64-1.jpg

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