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台湾微杆菌新种,从沿海土壤中分离得到。

Microbulbifer taiwanensis sp. nov., isolated from coastal soil.

机构信息

Institut für Angewandte Mikrobiologie, Justus-Liebig-Universität Giessen, D-35392 Giessen, Germany.

Yenepoya Research Centre, Yenepoya University, University Road, Deralakatee, Mangalore, Karnataka, India.

出版信息

Int J Syst Evol Microbiol. 2012 Oct;62(Pt 10):2485-2489. doi: 10.1099/ijs.0.034512-0. Epub 2011 Dec 9.

Abstract

A Gram-negative, non-spore-forming rod (CC-LN1-12(T)) was isolated from coastal soil samples of Lutao Island (Green Island), Taiwan, and its taxonomic position was studied. 16S rRNA gene sequence analysis showed that isolate CC-LN1-12(T) was grouped into the Microbulbifer cluster, with the highest similarities to Microbulbifer okinawensis ABABA23(T) (97.9 %), Microbulbifer maritimus TF-17(T) (97.7 %) and Microbulbifer donghaiensis CN85(T) (97.7 %), similarities to all other species of the genus Microbulbifer were lower than 96.8 %. The polyamine pattern contained the major compounds spermidine and cadaverine. The fatty acid profile, comprising the major fatty acids iso-C(15 : 0), iso-C(17 : 1)ω9c, C(18 : 1)ω7c and iso-C(11 : 0) 3-OH as the major hydroxylated fatty acid, supported the affiliation of strain CC-LN1-12(T) to the genus Microbulbifer. DNA-DNA hybridizations between strain CC-LN1-12(T) and Microbulbifer okinawensis ABABA23(T), M. donghaiensis CN85(T) and M. maritimus JCM 12187(T) resulted in relatedness values of 21.5 % (14.3 %, reciprocal analysis), 35.9 % (48.5 %, reciprocal analysis) and 48.1 % (52.1 %, reciprocal analysis), respectively. From these data, as well as from physiological and biochemical tests, strain CC-LN1-12(T) could be clearly differentiated from the most closely related species of the genus Microbulbifer. It is concluded that strain CC-LN1-12(T) represents a novel species, for which the name Microbulbifer taiwanensis sp. nov. is proposed. The type strain is CC-LN1-12(T) ( = LMG 26125(T) = CCM 7856(T)).

摘要

一株革兰氏阴性、非孢子形成的棒状菌(CC-LN1-12(T))从台湾绿岛(火烧岛)沿海土壤样本中分离出来,并对其分类地位进行了研究。16S rRNA 基因序列分析表明,分离株 CC-LN1-12(T) 属于微杆菌属(Microbulbifer),与 Microbulbifer okinawensis ABABA23(T)(97.9%)、Microbulbifer maritimus TF-17(T)(97.7%)和 Microbulbifer donghaiensis CN85(T)(97.7%)的相似度最高,与属内所有其他种的相似度均低于 96.8%。聚胺模式包含主要化合物腐胺和尸胺。脂肪酸图谱由主要脂肪酸 iso-C(15:0)、iso-C(17:1)ω9c、C(18:1)ω7c 和 iso-C(11:0) 3-OH 组成,主要的羟基化脂肪酸,支持菌株 CC-LN1-12(T) 与微杆菌属的隶属关系。菌株 CC-LN1-12(T)与 Microbulbifer okinawensis ABABA23(T)、Microbulbifer donghaiensis CN85(T) 和 Microbulbifer maritimus JCM 12187(T) 的 DNA-DNA 杂交产生的相关性值分别为 21.5%(14.3%,反向分析)、35.9%(48.5%,反向分析)和 48.1%(52.1%,反向分析)。从这些数据以及生理生化试验来看,菌株 CC-LN1-12(T) 可与微杆菌属中最密切相关的种明显区分开来。因此,菌株 CC-LN1-12(T) 代表一个新种,建议命名为台湾微杆菌(Microbulbifer taiwanensis)sp. nov.。其模式株为 CC-LN1-12(T)(=LMG 26125(T)=CCM 7856(T))。

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