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微生粘球菌新型种和微生粘球菌冲绳新型种,来自红树林的几丁质降解细菌。

Microbulbifer chitinilyticus sp. nov. and Microbulbifer okinawensis sp. nov., chitin-degrading bacteria isolated from mangrove forests.

机构信息

International Graduate School of Arts and Sciences, Yokohama City University, 22-2 Seto, Kanazawa-ku, Yokohama 236-0027, Japan.

Extremobiosphere Research Program, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka 237-0061, Japan.

出版信息

Int J Syst Evol Microbiol. 2011 Sep;61(Pt 9):2215-2220. doi: 10.1099/ijs.0.024158-0. Epub 2010 Oct 8.

Abstract

Three chitin-degrading strains representing two novel species were isolated from mangrove forests in Okinawa, Japan. The isolates, ABABA23(T), ABABA211 and ABABA212(T), were Gram-negative, non-spore-forming, strictly aerobic chemo-organotrophs. The novel strains produced Q-8 as the major isoprenoid quinone component. The predominant fatty acids were iso-C₁₅:₀ and C₁₆:₀. On the basis of 16S rRNA gene sequence analysis, the isolates were closely affiliated with members of the genus Microbulbifer. The DNA G+C contents of strains ABABA23(T) and ABABA212(T) were 57.8 and 60.2 mol%, respectively. DNA-DNA relatedness values between these two strains and Microbulbifer reference strains were significantly lower than 70 %, the generally accepted threshold level below which strains are considered to belong to separate species. Based on differences in taxonomic characteristics, the three isolates represent two novel species of the genus Microbulbifer, for which the names Microbulbifer chitinilyticus sp. nov. (type strain, ABABA212(T) = JCM 16148(T) = NCIMB 14577(T)) and Microbulbifer okinawensis sp. nov. (type strain, ABABA23(T) = JCM 16147(T) = NCIMB 14576(T); reference strain, ABABA211) are proposed.

摘要

从日本冲绳的红树林中分离到了三株能降解几丁质的菌株,代表了两个新种。这些分离株,ABABA23(T)、ABABA211 和 ABABA212(T),是革兰氏阴性、非孢子形成、严格需氧的化能有机营养型菌。新型菌株产生 Q-8 作为主要的类异戊二烯醌成分。主要脂肪酸为 iso-C₁₅:₀ 和 C₁₆:₀。基于 16S rRNA 基因序列分析,这些分离株与 Microbulbifer 属的成员密切相关。菌株 ABABA23(T) 和 ABABA212(T) 的 DNA G+C 含量分别为 57.8 和 60.2 mol%。这两株菌与 Microbulbifer 参考菌株之间的 DNA-DNA 相关性值明显低于 70%,这是通常被认为菌株属于不同种的界限值。基于分类特征的差异,这三个分离株代表了 Microbulbifer 属的两个新种,分别命名为:Microbulbifer chitinilyticus sp. nov.(模式菌株,ABABA212(T) = JCM 16148(T) = NCIMB 14577(T))和 Microbulbifer okinawensis sp. nov.(模式菌株,ABABA23(T) = JCM 16147(T) = NCIMB 14576(T);参考菌株,ABABA211)。

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