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Transcriptome analyses to investigate the pathogenesis of RNA splicing factor retinitis pigmentosa.

作者信息

Farkas Michael H, Grant Greg R, Pierce Eric A

机构信息

Ocular Genomics Institute, Berman Gund Laboratory, Department of Ophthalmology, Massachusetts Eye and Ear Infirmary, 243 Charles St., Boston, MA 02114, USA.

出版信息

Adv Exp Med Biol. 2012;723:519-25. doi: 10.1007/978-1-4614-0631-0_65.

DOI:10.1007/978-1-4614-0631-0_65
PMID:22183372
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6387625/
Abstract
摘要

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本文引用的文献

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Three gene-targeted mouse models of RNA splicing factor RP show late-onset RPE and retinal degeneration.三种 RNA 剪接因子 RP 的基因靶向小鼠模型显示出晚发性 RPE 和视网膜变性。
Invest Ophthalmol Vis Sci. 2011 Jan 5;52(1):190-8. doi: 10.1167/iovs.10-5194. Print 2011 Jan.
2
Cloud-scale RNA-sequencing differential expression analysis with Myrna.利用 Myrna 进行云规模 RNA-seq 差异表达分析。
Genome Biol. 2010;11(8):R83. doi: 10.1186/gb-2010-11-8-r83. Epub 2010 Aug 11.
3
A survey of sequence alignment algorithms for next-generation sequencing.下一代测序序列比对算法综述。
Brief Bioinform. 2010 Sep;11(5):473-83. doi: 10.1093/bib/bbq015. Epub 2010 May 11.
4
Digital transcriptome profiling from attomole-level RNA samples.从飞摩尔级 RNA 样本进行数字转录组谱分析。
Genome Res. 2010 Apr;20(4):519-25. doi: 10.1101/gr.102129.109. Epub 2010 Feb 4.
5
Protective effects of human iPS-derived retinal pigment epithelium cell transplantation in the retinal dystrophic rat.人诱导多能干细胞来源的视网膜色素上皮细胞移植对视网膜变性大鼠的保护作用。
PLoS One. 2009 Dec 3;4(12):e8152. doi: 10.1371/journal.pone.0008152.
6
Autosomal-dominant retinitis pigmentosa caused by a mutation in SNRNP200, a gene required for unwinding of U4/U6 snRNAs.由SNRNP200基因(U4/U6小核RNA解旋所需基因)突变引起的常染色体显性视网膜色素变性。
Am J Hum Genet. 2009 Nov;85(5):617-27. doi: 10.1016/j.ajhg.2009.09.020. Epub 2009 Oct 29.
7
Next-generation gap.下一代差距。
Nat Methods. 2009 Nov;6(11 Suppl):S2-5. doi: 10.1038/nmeth.f.268.
8
Derivation of functional retinal pigmented epithelium from induced pluripotent stem cells.诱导多能干细胞分化为功能性视网膜色素上皮细胞。
Stem Cells. 2009 Oct;27(10):2427-34. doi: 10.1002/stem.189.
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Short-read sequencing technologies for transcriptional analyses.用于转录分析的短读长测序技术。
Annu Rev Plant Biol. 2009;60:305-33. doi: 10.1146/annurev.arplant.043008.092032.
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Current-generation high-throughput sequencing: deepening insights into mammalian transcriptomes.当代高通量测序:深化对哺乳动物转录组的认识
Genes Dev. 2009 Jun 15;23(12):1379-86. doi: 10.1101/gad.1788009.