Departamento de Química Física y Analítica, Universitat Jaume I, Castelló, Spain.
J Comput Chem. 2012 Mar 15;33(7):748-56. doi: 10.1002/jcc.22898. Epub 2011 Dec 20.
We analyze the behavior of the energy profile of the ring-closure process for the transformation of (3Z,5Z)-octa-1,3,5,7-tetraene 5 to (1Z,3Z,5Z)-cycloocta-1,3,5-triene 6 through a combination of electron localization function (ELF) and catastrophe theory (CT). From this analysis, concepts such as bond breaking/forming processes, formation/annihilation of lone pairs, and other electron pair rearrangements arise naturally through the reaction progress simply in terms of the different ways of pairing up the electrons. A relationship between the topology and the nature of the bond breaking/forming processes along this rearrangement is reported. The different domains of structural stability of the ELF occurring along the intrinsic reaction path have been identified. The reaction mechanism consists of six steps separated by fold and cusp catastrophes. The transition structure is observed in the third step, d(C1-C8) = 2.342 Å, where all bonds have topological signature of single bonds (C-C). The "new" C1-C8 single bond is not formed in transition state and respective catastrophe of the ELF field (cusp) is localized in the last step, d(C1-C8) ≈ 1.97 Å, where the two monosynaptic nonbonding basins V(C1) and V(C8) are joined into single disynaptic bonding basin V(C1,C8). The V(C1,C8) basin corresponds to classical picture of the C1-C8 bond in the Lewis formula. In cycloocta-1,3,5-triene 6 the single C1-C8 bond is characterized by relatively small basin population 1.72e, which is much smaller than other single bonds with 2.03 and 2.26e.
我们通过电子定域函数(ELF)和突变理论(CT)的组合分析了(3Z,5Z)-辛-1,3,5,7-四烯 5 环化过程的能量分布行为转变为(1Z,3Z,5Z)-环辛-1,3,5-三烯 6。通过这种分析,在反应过程中,通过电子配对的不同方式,自然会出现键的断裂/形成过程、孤对的形成/消除以及其他电子对重排等概念。报告了拓扑结构与该重排过程中键的断裂/形成过程的性质之间的关系。沿着固有反应路径,已经确定了发生的 ELF 结构稳定性的不同域。反应机理由六个步骤组成,这些步骤由折叠和尖点突变分开。在第三步,d(C1-C8)= 2.342 Å,观察到过渡态,其中所有键都具有单键的拓扑特征(C-C)。在过渡态中没有形成“新的”C1-C8 单键,而相应的 ELF 场(尖点)突变位于最后一步,d(C1-C8)≈1.97 Å,其中两个单突触非键合盆地 V(C1)和 V(C8)被连接成单个双突触键合盆地 V(C1,C8)。V(C1,C8)盆地对应于路易斯公式中 C1-C8 键的经典图像。在环辛-1,3,5-三烯 6 中,单个 C1-C8 键的特征是盆地人口相对较小,为 1.72e,远小于其他单键的 2.03 和 2.26e。