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本文引用的文献

1
Directed evolution of fungal laccases.真菌漆酶的定向进化。
Curr Genomics. 2011 Apr;12(2):113-22. doi: 10.2174/138920211795564322.
2
Laboratory evolution of high-redox potential laccases.高氧化还原电位漆酶的实验室进化
Chem Biol. 2010 Sep 24;17(9):1030-41. doi: 10.1016/j.chembiol.2010.07.010.
3
Mutagenesis protocols in Saccharomyces cerevisiae by in vivo overlap extension.通过体内重叠延伸在酿酒酵母中进行诱变实验方案。
Methods Mol Biol. 2010;634:3-14. doi: 10.1007/978-1-60761-652-8_1.
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Laccases and their natural mediators: biotechnological tools for sustainable eco-friendly processes.漆酶及其天然介体:可持续环保工艺的生物技术工具。
Biotechnol Adv. 2010 Nov-Dec;28(6):694-705. doi: 10.1016/j.biotechadv.2010.05.002. Epub 2010 May 13.
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Evolving thermostability in mutant libraries of ligninolytic oxidoreductases expressed in yeast.在酵母中表达的木质素氧化还原酶突变文库中耐热性的演变。
Microb Cell Fact. 2010 Mar 18;9:17. doi: 10.1186/1475-2859-9-17.
6
Effect of ethanol on fluxes of water and protons across the plasma membrane of Saccharomyces cerevisiae.乙醇对酿酒酵母质膜上水和质子通量的影响。
FEMS Yeast Res. 2010 May;10(3):252-8. doi: 10.1111/j.1567-1364.2010.00607.x. Epub 2010 Jan 13.
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Exploring protein fitness landscapes by directed evolution.通过定向进化探索蛋白质适应度景观。
Nat Rev Mol Cell Biol. 2009 Dec;10(12):866-76. doi: 10.1038/nrm2805.
8
Modeling the 3-D structure of a recombinant laccase from Trametes trogii active at a pH close to neutrality.模拟接近中性 pH 条件下具有活性的重组云芝漆酶的 3-D 结构。
Protein J. 2009 Dec;28(9-10):375-83. doi: 10.1007/s10930-009-9204-1.
9
Structure-function studies of a Melanocarpus albomyces laccase suggest a pathway for oxidation of phenolic compounds.对一种白黑脉菌漆酶的结构-功能研究揭示了酚类化合物的氧化途径。
J Mol Biol. 2009 Oct 2;392(4):895-909. doi: 10.1016/j.jmb.2009.06.053. Epub 2009 Jun 27.
10
In the light of directed evolution: pathways of adaptive protein evolution.鉴于定向进化:适应性蛋白质进化的途径。
Proc Natl Acad Sci U S A. 2009 Jun 16;106 Suppl 1(Suppl 1):9995-10000. doi: 10.1073/pnas.0901522106. Epub 2009 Jun 15.

工程平台用于定向进化来自红绒盖牛肝菌的漆酶。

Engineering platforms for directed evolution of Laccase from Pycnoporus cinnabarinus.

机构信息

Department of Biocatalysis, Institute of Catalysis, Madrid, Spain.

出版信息

Appl Environ Microbiol. 2012 Mar;78(5):1370-84. doi: 10.1128/AEM.07530-11. Epub 2011 Dec 30.

DOI:10.1128/AEM.07530-11
PMID:22210206
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3294479/
Abstract

While the Pycnoporus cinnabarinus laccase (PcL) is one of the most promising high-redox-potential enzymes for environmental biocatalysis, its practical use has to date remained limited due to the lack of directed evolution platforms with which to improve its features. Here, we describe the construction of a PcL fusion gene and the optimization of conditions to induce its functional expression in Saccharomyces cerevisiae, facilitating its directed evolution and semirational engineering. The native PcL signal peptide was replaced by the α-factor preproleader, and this construct was subjected to six rounds of evolution coupled to a multiscreening assay based on the oxidation of natural and synthetic redox mediators at more neutral pHs. The laccase total activity was enhanced 8,000-fold: the evolved α-factor preproleader improved secretion levels 40-fold, and several mutations in mature laccase provided a 13.7-fold increase in k(cat). While the pH activity profile was shifted to more neutral values, the thermostability and the broad substrate specificity of PcL were retained. Evolved variants were highly secreted by Aspergillus niger (∼23 mg/liter), which addresses the potential use of this combined-expression system for protein engineering. The mapping of mutations onto the PcL crystal structure shed new light on the oxidation of phenolic and nonphenolic substrates. Furthermore, some mutations arising in the evolved preproleader highlighted its potential for heterologous expression of fungal laccases in yeast (S. cerevisiae).

摘要

虽然云芝漆酶(PcL)是最有前途的高氧化还原电位酶之一,适用于环境生物催化,但由于缺乏定向进化平台来改善其特性,其实际应用至今仍然受到限制。在这里,我们描述了 PcL 融合基因的构建,并优化了在酿酒酵母中诱导其功能表达的条件,从而促进了其定向进化和半理性工程。将天然 PcL 信号肽替换为α因子前导肽,该构建物经过六轮进化,并结合基于在更中性 pH 值下氧化天然和合成氧化还原介体的多筛检测定法进行筛选。漆酶总活性提高了 8000 倍:进化后的α因子前导肽使分泌水平提高了 40 倍,成熟漆酶的几个突变使 k(cat)提高了 13.7 倍。虽然 pH 活性谱向更中性值偏移,但 PcL 的热稳定性和广泛的底物特异性得以保留。进化变体在黑曲霉中的分泌量很高(约 23mg/L),这解决了该组合表达系统在蛋白质工程中的潜在用途。突变在 PcL 晶体结构上的映射为酚类和非酚类底物的氧化提供了新的见解。此外,在进化的前导肽中出现的一些突变突出了其在酵母(酿酒酵母)中异源表达真菌漆酶的潜力。