Suppr超能文献

皮肤的遗传学和表观遗传学与深度测序相遇。

Genetics and epigenetics of the skin meet deep sequence.

机构信息

Department of Dermatology, University of California, San Francisco, San Francisco, California 94143, USA.

出版信息

J Invest Dermatol. 2012 Mar;132(3 Pt 2):923-32. doi: 10.1038/jid.2011.436. Epub 2012 Jan 12.

Abstract

Rapid advances in next-generation sequencing technology are revolutionizing approaches to genomic and epigenomic studies of skin. Deep sequencing of cutaneous malignancies reveals heavily mutagenized genomes with large numbers of low-prevalence mutations and multiple resistance mechanisms to targeted therapies. Next-generation sequencing approaches have already paid rich dividends in identifying the genetic causes of dermatologic disease, both in heritable mutations and the somatic aberrations that underlie cutaneous mosaicism. Although epigenetic alterations clearly influence tumorigenesis, pluripotent stem cell biology, and epidermal cell lineage decisions, labor and cost-intensive approaches long delayed a genome-scale perspective. New insights into epigenomic mechanisms in skin disease should arise from the accelerating assessment of histone modification, DNA methylation, and related gene expression signatures.

摘要

下一代测序技术的快速发展正在彻底改变皮肤的基因组学和表观基因组学研究方法。皮肤恶性肿瘤的深度测序揭示了高度突变的基因组,其中存在大量低频率的突变和多种针对靶向治疗的耐药机制。下一代测序方法已经在确定皮肤科疾病的遗传原因方面取得了丰硕的成果,包括遗传性突变和导致皮肤嵌合体的体细胞异常。尽管表观遗传改变显然会影响肿瘤发生、多能干细胞生物学和表皮细胞谱系决定,但劳动力和成本密集型方法长期以来一直阻碍了全基因组视角的发展。对皮肤疾病中表观基因组机制的新认识应该来自于加速评估组蛋白修饰、DNA 甲基化和相关基因表达特征。

相似文献

1
Genetics and epigenetics of the skin meet deep sequence.皮肤的遗传学和表观遗传学与深度测序相遇。
J Invest Dermatol. 2012 Mar;132(3 Pt 2):923-32. doi: 10.1038/jid.2011.436. Epub 2012 Jan 12.
2
Long noncoding RNA: significance and potential in skin biology.长链非编码RNA:在皮肤生物学中的意义与潜力
Cold Spring Harb Perspect Med. 2014 May 1;4(5):a015404. doi: 10.1101/cshperspect.a015404.
3
Epigenetics and dermatological disease.表观遗传学与皮肤病
Pharmacogenomics. 2008 Dec;9(12):1835-50. doi: 10.2217/14622416.9.12.1835.
4
Mosaic manifestations of monogenic skin diseases.单基因皮肤病的镶嵌表现。
J Dtsch Dermatol Ges. 2009 Sep;7(9):744-48. doi: 10.1111/j.1610-0387.2009.07033.x.
5
Current insights into the epigenetic mechanisms of skin cancer.皮肤癌表观遗传机制的最新研究进展。
Dermatol Ther. 2019 Jul;32(4):e12964. doi: 10.1111/dth.12964. Epub 2019 May 27.
7
Aberrant DNA methylation in skin diseases.皮肤疾病中的异常DNA甲基化。
J Dermatol Sci. 2009 Jun;54(3):143-9. doi: 10.1016/j.jdermsci.2009.01.009. Epub 2009 Apr 22.
8
Toward an integrated genetic and epigenetic approach to Alzheimer's disease.走向阿尔茨海默病的综合遗传和表观遗传方法。
Neurobiol Aging. 2011 Jul;32(7):1188-91. doi: 10.1016/j.neurobiolaging.2010.10.021. Epub 2011 Apr 16.
9
Epigenetic therapy and dermatologic disease: moving beyond CTCL.表观遗传疗法与皮肤病:超越蕈样肉芽肿
J Dermatolog Treat. 2019 Feb;30(1):68-73. doi: 10.1080/09546634.2018.1473550. Epub 2018 May 22.
10
[Tetraspanins in cutaneous physiopathology].[皮肤生理病理学中的四跨膜蛋白]
Med Sci (Paris). 2016 Mar;32(3):267-73. doi: 10.1051/medsci/20163203011. Epub 2016 Mar 23.

引用本文的文献

5
Genome-wide epigenetics.全基因组表观遗传学
J Invest Dermatol. 2013 Jun;133(6):e9. doi: 10.1038/jid.2013.173.

本文引用的文献

1
The BATTLE trial: personalizing therapy for lung cancer.BATTLE 试验:为肺癌患者实施个体化治疗。
Cancer Discov. 2011 Jun;1(1):44-53. doi: 10.1158/2159-8274.CD-10-0010. Epub 2011 Jun 1.
3
Loss-of-function mutations in Notch receptors in cutaneous and lung squamous cell carcinoma.Notch 受体功能丧失突变与皮肤和肺鳞癌。
Proc Natl Acad Sci U S A. 2011 Oct 25;108(43):17761-6. doi: 10.1073/pnas.1114669108. Epub 2011 Oct 17.
4
Temporal dissection of tumorigenesis in primary cancers.原发性癌症中肿瘤发生的时程剖析。
Cancer Discov. 2011 Jul;1(2):137-43. doi: 10.1158/2159-8290.CD-11-0028. Epub 2011 Jun 29.
7
The mutational landscape of head and neck squamous cell carcinoma.头颈部鳞状细胞癌的突变全景。
Science. 2011 Aug 26;333(6046):1157-60. doi: 10.1126/science.1208130. Epub 2011 Jul 28.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验