Department of Dermatology, University of California, San Francisco, San Francisco, California 94143, USA.
J Invest Dermatol. 2012 Mar;132(3 Pt 2):923-32. doi: 10.1038/jid.2011.436. Epub 2012 Jan 12.
Rapid advances in next-generation sequencing technology are revolutionizing approaches to genomic and epigenomic studies of skin. Deep sequencing of cutaneous malignancies reveals heavily mutagenized genomes with large numbers of low-prevalence mutations and multiple resistance mechanisms to targeted therapies. Next-generation sequencing approaches have already paid rich dividends in identifying the genetic causes of dermatologic disease, both in heritable mutations and the somatic aberrations that underlie cutaneous mosaicism. Although epigenetic alterations clearly influence tumorigenesis, pluripotent stem cell biology, and epidermal cell lineage decisions, labor and cost-intensive approaches long delayed a genome-scale perspective. New insights into epigenomic mechanisms in skin disease should arise from the accelerating assessment of histone modification, DNA methylation, and related gene expression signatures.
下一代测序技术的快速发展正在彻底改变皮肤的基因组学和表观基因组学研究方法。皮肤恶性肿瘤的深度测序揭示了高度突变的基因组,其中存在大量低频率的突变和多种针对靶向治疗的耐药机制。下一代测序方法已经在确定皮肤科疾病的遗传原因方面取得了丰硕的成果,包括遗传性突变和导致皮肤嵌合体的体细胞异常。尽管表观遗传改变显然会影响肿瘤发生、多能干细胞生物学和表皮细胞谱系决定,但劳动力和成本密集型方法长期以来一直阻碍了全基因组视角的发展。对皮肤疾病中表观基因组机制的新认识应该来自于加速评估组蛋白修饰、DNA 甲基化和相关基因表达特征。