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多瘤病毒晚期RNA中的多个5'末端帽结构。

Multiple 5' terminal cap structures in late polyoma virus RNA.

作者信息

Flavell A J, Cowie A, Legon S, Kamen R

出版信息

Cell. 1979 Feb;16(2):357-71. doi: 10.1016/0092-8674(79)90012-6.

DOI:10.1016/0092-8674(79)90012-6
PMID:222458
Abstract

Nuclear and cytoplasmic polyoma virus-specific RNA extracted from 32P-labeled mouse embryo cells late during productive viral infection was analyzed for the presence of 5' terminal capped structures by complete digestion with RNAases T1, T2 and A, followed by two-dimensional electrophoretic fractionation. Seven major cap I structures (m7 GpppNm1pN2p) were observed in both cases. These termini were further characterized by digestion with penicillium nuclease P1, followed by product analysis in a variety of alternative separate systems. Each structure had an individual combination of N1 and N2 nucleotides, where N1 was always a purine nucleotide but N2 was any nucleotide subject to the single exception that m7GpppGmpCp is found only in low yield. Four different cap II derivatives (m7GpppNm1pNm2pN3p) of four of the cap I structures were also detected in cytoplasmic RNA. None of the termini described derived from contaminating host cell RNA. All of these cap structures mapped on the polyoma viral DNA genome between 66 and 71 map units, a region distant from the 5' end of the bodies of two of the three late polyoma mRNAs. All the polyoma virus-specific cap structures, however, were present in each of the purified 16S, 18S and 19s late mRNAs. These data suggested that families of capped leader sequences of varying sizes are attached to the main body of each late polyoma mRNA species by a splicing mechanism.

摘要

从经32P标记的小鼠胚胎细胞在病毒生产性感染后期提取的核和细胞质多瘤病毒特异性RNA,通过用核糖核酸酶T1、T2和A完全消化,然后进行二维电泳分级分离,分析其5'末端帽状结构的存在情况。在两种情况下均观察到7种主要的帽I结构(m7GpppNm1pN2p)。通过用青霉核酸酶P1消化,然后在各种替代的分离系统中进行产物分析,对这些末端进行了进一步表征。每种结构都有N1和N2核苷酸的独特组合,其中N1总是嘌呤核苷酸,但N2可以是任何核苷酸,唯一的例外是m7GpppGmpCp的产量很低。在细胞质RNA中还检测到了4种帽I结构中的4种不同的帽II衍生物(m7GpppNm1pNm2pN3p)。所描述的末端均非来自污染的宿主细胞RNA。所有这些帽结构都定位在多瘤病毒DNA基因组的66至71个图谱单位之间,该区域距离三种晚期多瘤mRNA中两种的主体的5'端较远。然而,所有多瘤病毒特异性帽结构都存在于纯化的16S、18S和19S晚期mRNA的每一种中。这些数据表明,不同大小的带帽前导序列家族通过剪接机制连接到每种晚期多瘤mRNA物种的主体上。

相似文献

1
Multiple 5' terminal cap structures in late polyoma virus RNA.多瘤病毒晚期RNA中的多个5'末端帽结构。
Cell. 1979 Feb;16(2):357-71. doi: 10.1016/0092-8674(79)90012-6.
2
Splicing of the late mRNAs of polyoma virus does not occur in the cytoplasm of the infected cell.多瘤病毒晚期信使核糖核酸的剪接不在被感染细胞的细胞质中发生。
Nature. 1979 Dec 13;282(5740):686-91. doi: 10.1038/282686a0.
3
Coincidence of the promoter and capped 5' terminus of RNA from the adenovirus 2 major late transcription unit.腺病毒2型主要晚期转录单元RNA的启动子与加帽5'末端的重合
Cell. 1978 Dec;15(4):1463-75. doi: 10.1016/0092-8674(78)90070-3.
4
Characterisation of polyoma late mRNA leader sequences by molecular cloning and DNA sequence analysis.通过分子克隆和DNA序列分析对多瘤病毒晚期mRNA前导序列进行表征。
Nucleic Acids Res. 1980 Nov 11;8(21):4867-88. doi: 10.1093/nar/8.21.4867.
5
Sequences at the capped 5'-ends of polyoma virus late region mRNAs: an example of extreme terminal heterogeneity.多瘤病毒晚期区域mRNA 5' 端加帽序列:极端末端异质性的一个例子。
Nucleic Acids Res. 1981 Dec 11;9(23):6305-22. doi: 10.1093/nar/9.23.6305.
6
Amplification in the leader sequence of late polyoma virus mRNAs.多瘤病毒晚期mRNA前导序列中的扩增。
Cell. 1979 Feb;16(2):373-88. doi: 10.1016/0092-8674(79)90013-8.
7
Mapping the spliced and unspliced late lytic SV40 RNAs.绘制剪接和未剪接的晚期裂解性SV40 RNA图谱。
Cell. 1978 Aug;14(4):971-82. doi: 10.1016/0092-8674(78)90351-3.
8
Localization of three major cappe 5' ends of polyoma virus late mRNA's within a single tetranucleotide sequence in the viral genome.多瘤病毒晚期mRNA的三个主要帽状5'端在病毒基因组中的单个四核苷酸序列内的定位。
J Virol. 1980 Feb;33(2):902-8. doi: 10.1128/JVI.33.2.902-908.1980.
9
Polyoma virus early and late mRNAs in productively infected mouse 3T6 cells.多瘤病毒在高效感染的小鼠3T6细胞中的早期和晚期信使核糖核酸
J Virol. 1982 Oct;44(1):175-88. doi: 10.1128/JVI.44.1.175-188.1982.
10
Efficiency of processing of viral RNA during the early and late phases of productive infection by polyoma virus.多瘤病毒在生产性感染的早期和晚期阶段对病毒RNA的加工效率。
J Virol. 1981 Feb;37(2):628-35. doi: 10.1128/JVI.37.2.628-635.1981.

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Applications of Phosphate Modification and Labeling to Study (m)RNA Caps.磷酸化修饰和标记在研究(m)RNA 帽中的应用。
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RNA processing in the polyoma virus life cycle.多瘤病毒生命周期中的RNA加工
Front Biosci (Landmark Ed). 2009 Jun 1;14(13):4968-77. doi: 10.2741/3581.
5
The sequence and context of the 5' splice site govern the nuclear stability of polyoma virus late RNAs.5'剪接位点的序列和上下文决定了多瘤病毒晚期RNA的核稳定性。
Nucleic Acids Res. 1995 Dec 11;23(23):4812-7. doi: 10.1093/nar/23.23.4812.
6
The genome of minute virus of mice, an autonomous parvovirus, encodes two overlapping transcription units.小鼠微小病毒(一种自主细小病毒)的基因组编码两个重叠的转录单元。
Nucleic Acids Res. 1983 Feb 25;11(4):1019-38. doi: 10.1093/nar/11.4.1019.
7
Analysis of vaccinia virus transcriptional complexity in vitro and in vivo: characterization of RNase T1-resistant 5'-terminal oligonucleotides.痘苗病毒在体外和体内转录复杂性的分析:核糖核酸酶T1抗性5'-末端寡核苷酸的特性研究
J Virol. 1982 May;42(2):734-41. doi: 10.1128/JVI.42.2.734-741.1982.
8
Heterogeneity of the 5' terminus of hen ovalbumin messenger ribonucleic acid.鸡卵清蛋白信使核糖核酸5′末端的异质性
Nucleic Acids Res. 1981 Apr 10;9(7):1657-73. doi: 10.1093/nar/9.7.1657.
9
In vitro transcription of the inverted terminal repetition of the vaccinia virus genome: correspondence of initiation and cap sites.痘苗病毒基因组反向末端重复序列的体外转录:起始位点与帽位点的对应关系。
J Virol. 1981 Feb;37(2):738-47. doi: 10.1128/JVI.37.2.738-747.1981.
10
Polyoma virus early and late mRNAs in productively infected mouse 3T6 cells.多瘤病毒在高效感染的小鼠3T6细胞中的早期和晚期信使核糖核酸
J Virol. 1982 Oct;44(1):175-88. doi: 10.1128/JVI.44.1.175-188.1982.