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转座子介导的适应性和定向突变及其潜在的进化益处。

Transposon-mediated adaptive and directed mutations and their potential evolutionary benefits.

作者信息

Zhang Zhongge, Saier Milton H

机构信息

Division of Biological Sciences, Department of Molecular Biology, University of California at San Diego, La Jolla, CA, USA.

出版信息

J Mol Microbiol Biotechnol. 2011;21(1-2):59-70. doi: 10.1159/000333108. Epub 2012 Jan 13.

Abstract

Transposons, mobile genetic elements that can hop from one chromosomal location to another, are known to be both beneficial and deleterious to the cell that bears them. Their value in accelerating evolutionary adaptation is well recognized. We herein summarize published research dealing with these elements and then move on to review our own research efforts which focus on a small transposon that can induce mutations under the control of host factors in a process that phenotypically and mechanistically conforms to the definition of 'directed mutation'. Directed mutations occur at higher frequencies when they are beneficial, being induced by the stress condition that they relieve. Here, we review evidence for transposon-mediated directed mutation in Escherichia coli. Deletion mutants in the crp gene can not grow on glycerol (Glp(-)); however, these cells mutate specifically to efficient glycerol utilization (Glp(+)) at rates that are greatly enhanced by the presence of glycerol or the loss of the glycerol repressor (GlpR). These rates are greatly depressed by glucose or by glpR overexpression. Of the four tandem GlpR-binding sites (O1-O4) in the control region of the glpFK operon, O4 (downstream) specifically controls glpFK expression while O1 (upstream) controls mutation rate. Mutation is due to insertion of the small transposon IS5 into a specific site just upstream of the glpFK promoter. Mutational control by the glycerol regulon repressor GlpR is independent of the selection and assay procedures, and IS5 insertion into other gene activation sites is unaffected by the presence of glycerol or the loss of GlpR. The results establish the principle of transposon-mediated directed mutation, identify a protein responsible for its regulation, and define essential aspects of the mechanism.

摘要

转座子是一种可从一个染色体位置跳跃到另一个位置的移动遗传元件,已知其对携带它们的细胞既有益处也有危害。它们在加速进化适应方面的价值已得到充分认可。我们在此总结已发表的关于这些元件的研究,然后继续回顾我们自己的研究工作,这些工作聚焦于一种小转座子,它能在宿主因子的控制下诱导突变,该过程在表型和机制上符合“定向突变”的定义。当定向突变有益时,它们会在由其所缓解的应激条件诱导下以更高的频率发生。在此,我们回顾大肠杆菌中转座子介导的定向突变的证据。crp基因的缺失突变体不能在甘油上生长(Glp(-));然而,这些细胞会特异性地突变为能有效利用甘油(Glp(+)),其突变率在甘油存在或甘油阻遏物(GlpR)缺失时会大大提高。这些突变率在有葡萄糖存在或GlpR过表达时会大大降低。在glpFK操纵子控制区域的四个串联GlpR结合位点(O1 - O4)中,O4(下游)特异性控制glpFK的表达,而O1(上游)控制突变率。突变是由于小转座子IS5插入到glpFK启动子上游的一个特定位点。甘油调节子阻遏物GlpR对突变的控制独立于选择和检测程序,并且IS5插入到其他基因激活位点不受甘油存在或GlpR缺失的影响。这些结果确立了转座子介导的定向突变的原理,鉴定了负责其调控的一种蛋白质,并定义了该机制的基本方面。

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