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在环境胁迫下溞属(Daphnia pulex)四种金属硫蛋白基因的功能特征分析。

Functional characterization of four metallothionein genes in Daphnia pulex exposed to environmental stressors.

机构信息

Laboratory of Environmental Toxicology and Aquatic Ecology, Ghent University, Belgium.

出版信息

Aquat Toxicol. 2012 Apr;110-111:54-65. doi: 10.1016/j.aquatox.2011.12.010. Epub 2011 Dec 29.

DOI:10.1016/j.aquatox.2011.12.010
PMID:22266576
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3967237/
Abstract

We characterized the metallothionein genes (Mt1, Mt2, Mt3, and Mt4) in Daphnia pulex on both molecular and ecotoxicological level. We therefore conducted a bioinformatical analysis of the gene location and predicted protein sequence, and screened the upstream flanking region for regulatory elements. The number of these elements and their positions relative to the start codon varied strongly among the four genes and even among two gene duplicates (Mt1A and Mt1B), suggesting different roles of the four proteins in the organisms' response to stress. We subsequently conducted a chronic 16-day exposure of D. pulex to different environmental stressors (at sublethal levels causing approximately 50% reduction in reproduction). Based on prior knowledge, we exposed them to the metals Cd, Cu, and Ni, the moulting hormone hydroxyecdysone (20E), and the oxidative stressors cyanobacteria (Microcystis aeruginosa), and paraquat (Pq). We then compared mRNA expression levels of the four Mt genes under these stress conditions with control conditions in "The Chosen One" clone (TCO), for which the full genome was sequenced and annotated. All together, the mRNA expression results under the different stress regimes indicate that different Mt genes may play different and various roles in the response of D. pulex to stress and that some (but not all) of the differences among the four genes could be related to the pattern of regulatory elements in their upstream flanking region.

摘要

我们从分子和生态毒理学水平上对大型溞(Daphnia pulex)的金属硫蛋白基因(Mt1、Mt2、Mt3 和 Mt4)进行了特征描述。因此,我们对基因位置和预测蛋白序列进行了生物信息学分析,并筛选了上游调控元件。这四个基因甚至两个基因副本(Mt1A 和 Mt1B)之间的这些元件的数量及其相对于起始密码子的位置差异很大,这表明这四种蛋白质在生物体对压力的反应中具有不同的作用。随后,我们对大型溞进行了为期 16 天的慢性暴露实验,使其暴露于不同的环境胁迫下(亚致死水平,导致繁殖减少约 50%)。基于先前的知识,我们将它们暴露于金属 Cd、Cu 和 Ni、蜕皮激素 20E(20E)、以及蓝藻(微囊藻属)和百草枯(Pq)这两种氧化应激源下。然后,我们将这四种 Mt 基因在这些胁迫条件下的 mRNA 表达水平与“选定的一个”(TCO)克隆中的对照条件进行了比较,该克隆的全基因组已被测序和注释。总的来说,不同胁迫条件下的 mRNA 表达结果表明,不同的 Mt 基因可能在大型溞对胁迫的反应中发挥不同和各种作用,并且四个基因之间的一些(但不是全部)差异可能与它们上游调控元件的模式有关。

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