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温度的影响及与配体的相互作用对不同类型结合的双链 DNA 及其配体-DNA 复合物的解离的影响。电化学研究。

Influence of temperature and interactions with ligands on dissociation of dsDNA and ligand-dsDNA complexes of various types of binding. An electrochemical study.

机构信息

Department of Chemistry, University of Warsaw, ul. Pasteura 1, 02-093 Warsaw, Poland.

出版信息

Phys Chem Chem Phys. 2012 Mar 14;14(10):3408-13. doi: 10.1039/c2cp23824a. Epub 2012 Feb 2.

Abstract

Several medicinally important compounds that bind to dsDNA strands via intercalation (C-1311, C-1305, EtBr), major groove binding (Hoechst 33258) and covalent binding (cis-Pt) were examined. The obtained results suggest that both the transfer of conformation B to C and the denaturation process, for the ligand-dsDNA complexes, except for covalently bound cis-Pt, took place at higher temperatures compared to the unbound helix. Furthermore, much lower currents of electrooxidation of guanine at 100 °C, compared to the currents obtained at this temperature for dsDNA in the absence of ligands, suggest that the binding of ligands affects the way the dsDNA denaturates at increased temperatures and leads to formation of different forms of DNA single strands. The voltammetric results were compared with the data of two spectroscopic techniques: UV-Vis and CD.

摘要

几种通过嵌入(C-1311、C-1305、EtBr)、大沟结合(Hoechst 33258)和共价结合(顺式-Pt)与双链 DNA 链结合的具有医学重要性的化合物进行了研究。研究结果表明,对于配体-DNA 复合物,除了共价结合的顺式-Pt 之外,构象 B 向 C 的转移和变性过程都在比无配体的未结合螺旋更高的温度下发生。此外,与在没有配体的情况下在 100°C 下获得的 dsDNA 的电流相比,100°C 时鸟嘌呤的电氧化电流要低得多,这表明配体的结合会影响双链 DNA 在升高的温度下变性的方式,并导致不同形式的 DNA 单链的形成。伏安法结果与两种光谱技术(UV-Vis 和 CD)的数据进行了比较。

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