Radivoyevitch Tomas, Kunos Charles A
Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, Ohio 44106, USA.
Nucleosides Nucleotides Nucleic Acids. 2012;31(2):147-56. doi: 10.1080/15257770.2011.644370.
Mammalian ribonucleotide reductase (RNR) activity has been reported to be nonmonotonic in ATP. If many nonlinear models are to be fitted to such data automatically as part of a model search process, use of the same initial parameter values across all models can lead to too many poor fitting, monotonic least squares fits, i.e., false model rejections. We propose that such fits can be rescued by using as initial parameter estimates the final estimates of neighboring models that do have nonmonotonic fits; here models are neighbors if complexes that they represent differ by at most one ligand. We use this approach to show that troughs in RNR activity versus ATP can be fitted similarly well by models that do or do not demand a third ATP binding site.
据报道,哺乳动物核糖核苷酸还原酶(RNR)的活性在ATP中呈非单调变化。如果要在模型搜索过程中自动将许多非线性模型拟合到此类数据,那么在所有模型中使用相同的初始参数值可能会导致太多拟合不佳的单调最小二乘拟合,即错误地拒绝模型。我们建议,可以通过将具有非单调拟合的相邻模型的最终估计值用作初始参数估计值来挽救此类拟合;如果它们所代表的复合物最多相差一个配体,则这些模型为相邻模型。我们使用这种方法表明,无论模型是否需要第三个ATP结合位点,RNR活性与ATP关系中的低谷都能得到相似的良好拟合。