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CDD: a Conserved Domain Database for the functional annotation of proteins.CDD:一个用于蛋白质功能注释的保守结构域数据库。
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Colocalization analysis in fluorescence micrographs: verification of a more accurate calculation of pearson's correlation coefficient.荧光显微照片中的共定位分析:皮尔逊相关系数更精确计算的验证。
Microsc Microanal. 2010 Dec;16(6):710-24. doi: 10.1017/S143192761009389X. Epub 2010 Oct 15.
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LMBRD1: the gene for the cblF defect of vitamin B₁₂ metabolism.LMBRD1:钴胺素代谢 cblF 缺陷的基因。
J Inherit Metab Dis. 2011 Feb;34(1):121-6. doi: 10.1007/s10545-010-9083-9. Epub 2010 May 6.
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Self-organizing actin waves that simulate phagocytic cup structures.模拟吞噬杯结构的自组织肌动蛋白波。
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Insights into lysosomal cobalamin trafficking: lessons learned from cblF disease.溶酶体钴胺素转运的研究进展:cblF 病的启示。
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Endocytosis unplugged: multiple ways to enter the cell.内吞作用被解除:多种进入细胞的方式。
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Lipocalin-2: pro- or anti-apoptotic?脂联素 2:促凋亡还是抗凋亡?
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Identification of a putative lysosomal cobalamin exporter altered in the cblF defect of vitamin B12 metabolism.在维生素B12代谢的cblF缺陷中改变的一种假定溶酶体钴胺素转运蛋白的鉴定。
Nat Genet. 2009 Feb;41(2):234-9. doi: 10.1038/ng.294. Epub 2009 Jan 11.
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CDD: specific functional annotation with the Conserved Domain Database.CDD:使用保守结构域数据库进行特定功能注释。
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一种含有进化保守的LMBR1结构域的蛋白质的证据,该蛋白质与内吞杯相关并在盘基网柄菌的细胞迁移中起作用。

Evidence of an evolutionarily conserved LMBR1 domain-containing protein that associates with endocytic cups and plays a role in cell migration in dictyostelium discoideum.

作者信息

Kelsey Jessica S, Fastman Nathan M, Blumberg Daphne D

机构信息

Department of Biological Sciences, University of Maryland, Baltimore County, Baltimore, Maryland, USA.

出版信息

Eukaryot Cell. 2012 Apr;11(4):401-16. doi: 10.1128/EC.05186-11. Epub 2012 Feb 3.

DOI:10.1128/EC.05186-11
PMID:22307974
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3318307/
Abstract

The ampA gene plays a role in Dictyostelium discoideum cell migration. Loss of ampA function results in reduced ability of growing cells to migrate to folic acid and causes small plaques on bacterial lawns, while overexpression of AmpA results in a rapid-migration phenotype and correspondingly larger plaques than seen with wild-type cells. To help understand how the ampA gene functions, second-site suppressors were created by restriction enzyme-mediated integration (REMI) mutagenesis. These mutants were selected for their ability to reduce the large plaque size of the AmpA overexpresser strain. The lmbd2B gene was identified as a suppressor of an AmpA-overexpressing strain. The lmbd2B gene product belongs to the evolutionarily conserved LMBR1 protein family, some of whose known members are endocytic receptors associated with human diseases, such as anemia. In order to understand lmbd2B function, mRFP fusion proteins were created and lmbd2B knockout cell lines were established. Our findings indicate that the LMBD2B protein is found associated with endocytic cups. It colocalizes with proteins that play key roles in endocytic events and is localized to ruffles on the dorsal surfaces of growing cells. Vegetative lmbd2B-null cells display defects in cell migration. These cells have difficulty sensing the chemoattractant folic acid, as indicated by a decrease in their chemotactic index. lmbd2B-null cells also appear to have difficulty establishing a front/back orientation to facilitate migration. A role for lmbd2B in development is also suggested. Our research gives insight into the function of a previously uncharacterized branch of the LMBR1 family of proteins. We provide evidence of an LMBR1 family plasma membrane protein that associates with endocytic cups and plays a role in chemotaxis.

摘要

ampA基因在盘基网柄菌细胞迁移中发挥作用。ampA功能丧失会导致生长中的细胞向叶酸迁移的能力降低,并在细菌菌苔上形成小菌斑,而AmpA的过表达则会导致快速迁移表型,且菌斑比野生型细胞的相应菌斑更大。为了帮助理解ampA基因的功能,通过限制性内切酶介导的整合(REMI)诱变产生了第二位点抑制子。选择这些突变体是因为它们能够减小AmpA过表达菌株的大菌斑大小。lmbd2B基因被鉴定为AmpA过表达菌株的抑制子。lmbd2B基因产物属于进化上保守的LMBR1蛋白家族,其一些已知成员是与人类疾病(如贫血)相关的内吞受体。为了理解lmbd2B的功能,构建了mRFP融合蛋白并建立了lmbd2B基因敲除细胞系。我们的研究结果表明,LMBD2B蛋白与内吞小窝相关。它与在内吞事件中起关键作用的蛋白质共定位,并定位于生长细胞背表面的褶皱处。营养期的lmbd2B基因缺失细胞在细胞迁移方面表现出缺陷。这些细胞在感知趋化因子叶酸方面存在困难,这通过它们趋化指数的降低得以体现。lmbd2B基因缺失细胞在建立前后方向以促进迁移方面似乎也存在困难。还表明了lmbd2B在发育中的作用。我们的研究深入了解了LMBR1蛋白家族一个先前未被表征的分支的功能。我们提供了一种LMBR1家族质膜蛋白的证据,该蛋白与内吞小窝相关并在趋化作用中发挥作用。