Structural and Computational Biology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi 110067, India.
Sci Rep. 2011;1:188. doi: 10.1038/srep00188. Epub 2011 Dec 12.
Accuracy of aminoacylation is dependent on maintaining fidelity during attachment of amino acids to cognate tRNAs. Cis- and trans-editing protein factors impose quality control during protein translation, and 8 of 36 Plasmodium falciparum aminoacyl-tRNA synthetase (aaRS) assemblies contain canonical putative editing modules. Based on expression and localization profiles of these 8 aaRSs, we propose an asymmetric distribution between the parasite cytoplasm and its apicoplast of putative editing-domain containing aaRSs. We also show that the single copy alanyl- and threonyl-tRNA synthetases are dually targeted to parasite cytoplasm and apicoplast. This bipolar presence of two unique synthetases presents opportunity for inhibitor targeting their aminoacylation and editing activities in twin parasite compartments. We used this approach to identify specific inhibitors against the alanyl- and threonyl-tRNA synthetases. Further development of such inhibitors may lead to anti-parasitics which simultaneously block protein translation in two key parasite organelles, a strategy of wider applicability for pathogen control.
氨酰基转移酶的准确性取决于在将氨基酸与相应的 tRNA 结合时保持保真度。顺式和反式编辑蛋白因子在蛋白质翻译过程中实施质量控制,36 种疟原虫氨酰-tRNA 合成酶(aaRS)中有 8 种含有典型的假定编辑模块。基于这 8 种 aaRS 的表达和定位谱,我们提出了寄生虫细胞质与其质体之间的假定编辑域包含 aaRS 的不对称分布。我们还表明,单个拷贝的丙氨酰-tRNA 合成酶和苏氨酰-tRNA 合成酶都靶向寄生虫细胞质和质体。这种两个独特合成酶的双极存在为针对这两个寄生虫隔间中它们的氨酰化和编辑活性的抑制剂靶向提供了机会。我们使用这种方法来鉴定针对丙氨酰-tRNA 合成酶和苏氨酰-tRNA 合成酶的特异性抑制剂。这种抑制剂的进一步开发可能会导致同时阻断两种关键寄生虫细胞器中蛋白质翻译的抗寄生虫药物,这是一种更广泛适用于病原体控制的策略。