Université de Strasbourg/CNRS, UMR, Institut de Chimie, France.
Chem Phys Lipids. 2012 Apr;165(3):282-301. doi: 10.1016/j.chemphyslip.2012.01.009. Epub 2012 Feb 17.
Solid-state NMR spectroscopic techniques provide valuable information about the structure, dynamics and topology of membrane-inserted polypeptides. In particular antimicrobial peptides (or 'host defence peptides') have early on been investigated by solid-state NMR spectroscopy and many technical innovations in this domain have been developed with the help of these compounds when reconstituted into oriented phospholipid bilayers. Using solid-state NMR spectroscopy it could be shown for the first time that magainins or derivatives thereof exhibit potent antimicrobial activities when their cationic amphipathic helix is oriented parallel to the bilayer surface, a configuration found in later years for many other linear cationic amphipathic peptides. In contrast transmembrane alignments or lipid-dependent tilt angles have been found for more hydrophobic sequences such as alamethicin or β-hairpin antimicrobials. This review presents various solid-state NMR approaches and develops the basic underlying concept how angular information can be obtained from oriented samples. It is demonstrated how this information is used to calculate structures and topologies of peptides in their native liquid-disordered phospholipid bilayer environment. Special emphasis is given to discuss which NMR parameters provide the most complementary information, the minimal number of restraints needed and the effect of motions on the analysis of the NMR spectra. Furthermore, recent (31)P and (2)H solid-state NMR measurements of lipids are presented including some unpublished data which aim at investigating the morphological and structural changes of oriented or non-oriented phospholipids. Finally the structural models that have been proposed for the mechanisms of action of these peptides will be presented and discussed in view of the solid-state NMR and other biophysical experiments.
固态 NMR 光谱技术为研究插入膜中的多肽的结构、动力学和拓扑结构提供了有价值的信息。特别是抗菌肽(或“宿主防御肽”)很早就通过固态 NMR 光谱进行了研究,并且在将其重构成定向磷脂双层时,许多技术创新都是在这些化合物的帮助下开发的。通过固态 NMR 光谱,首次表明当阳离子两亲螺旋平行于双层表面取向时,抗菌肽或其衍生物具有很强的抗菌活性,这种构象在后来的许多其他线性阳离子两亲肽中都有发现。相比之下,对于疏水性序列,如 alamethicin 或 β-发夹抗菌肽,已经发现了跨膜排列或脂质依赖性倾斜角度。本文介绍了各种固态 NMR 方法,并提出了如何从定向样品中获得角度信息的基本概念。本文展示了如何利用这些信息来计算肽在其天然无序磷脂双层环境中的结构和拓扑结构。特别强调讨论哪些 NMR 参数提供最互补的信息、分析 NMR 谱所需的最少约束数量以及运动对分析的影响。此外,还介绍了最近的(31)P 和(2)H 固态 NMR 脂质测量结果,包括一些未发表的数据,旨在研究定向或非定向磷脂的形态和结构变化。最后,将介绍并讨论这些肽的作用机制的结构模型,以固态 NMR 和其他生物物理实验为依据。