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连续的创始者效应在分布区扩张过程中:遗传漂变的空间类似物。

Serial founder effects during range expansion: a spatial analog of genetic drift.

机构信息

Department of Integrative Biology, University of California, Berkeley, California 94720-3140, USA.

出版信息

Genetics. 2012 May;191(1):171-81. doi: 10.1534/genetics.112.139022. Epub 2012 Feb 23.

Abstract

Range expansions cause a series of founder events. We show that, in a one-dimensional habitat, these founder events are the spatial analog of genetic drift in a randomly mating population. The spatial series of allele frequencies created by successive founder events is equivalent to the time series of allele frequencies in a population of effective size ke, the effective number of founders. We derive an expression for ke in a discrete-population model that allows for local population growth and migration among established populations. If there is selection, the net effect is determined approximately by the product of the selection coefficients and the number of generations between successive founding events. We use the model of a single population to compute analytically several quantities for an allele present in the source population: (i) the probability that it survives the series of colonization events, (ii) the probability that it reaches a specified threshold frequency in the last population, and (iii) the mean and variance of the frequencies in each population. We show that the analytic theory provides a good approximation to simulation results. A consequence of our approximation is that the average heterozygosity of neutral alleles decreases by a factor of 1-1/(2ke) in each new population. Therefore, the population genetic consequences of surfing can be predicted approximately by the effective number of founders and the effective selection coefficients, even in the presence of migration among populations. We also show that our analytic results are applicable to a model of range expansion in a continuously distributed population.

摘要

范围扩展会导致一系列奠基者事件。我们表明,在一维生境中,这些奠基者事件是随机交配群体中遗传漂变的空间类比。由连续奠基者事件产生的等位基因频率的空间序列等同于有效大小为 ke 的种群的等位基因频率时间序列,其中 ke 是有效奠基者的数量。我们在允许局部种群增长和已建立种群之间迁移的离散种群模型中推导出了 ke 的表达式。如果存在选择,净效应大致由选择系数和连续奠基事件之间的世代数的乘积决定。我们使用单个种群模型来分析存在于源种群中的一个等位基因的几个数量:(i)它在一系列殖民化事件中幸存的概率,(ii)它在最后一个种群中达到指定阈值频率的概率,以及 (iii)每个种群中频率的均值和方差。我们表明,分析理论为模拟结果提供了很好的近似。我们的近似的一个结果是,中性等位基因的平均杂合度在每个新种群中降低了 1-1/(2ke)的因子。因此,即使在种群之间存在迁移的情况下,冲浪的种群遗传后果也可以通过有效奠基者数量和有效选择系数来大致预测。我们还表明,我们的分析结果适用于连续分布种群中的范围扩展模型。

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