• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

解析人类疾病中的可变基因组和表观基因组。

Resolving the variable genome and epigenome in human disease.

机构信息

Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford, UK.

出版信息

J Intern Med. 2012 Apr;271(4):379-91. doi: 10.1111/j.1365-2796.2011.02508.x.

DOI:10.1111/j.1365-2796.2011.02508.x
PMID:22443201
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4442130/
Abstract

The individual human genome and epigenome are being defined at unprecedented resolution by current advances in sequencing technologies with important implications for human disease. This review uses examples relevant to clinical practice to illustrate the functional consequences of genetic and epigenetic variation. The insights gained from genome-wide association studies are described together with current efforts to understand the role of rare variants in common disease, set in the context of recent successes in Mendelian traits through the application of whole exome sequencing. The application of functional genomics to interrogate the genome and epigenome, build up an integrated picture of the regulatory genomic landscape and inform disease association studies is discussed, together with the role of expression quantitative trait mapping and analysis of allele-specific gene expression.

摘要

当前测序技术的进步正在以前所未有的分辨率定义个体人类基因组和表观基因组,这对人类疾病具有重要意义。本综述使用与临床实践相关的例子来说明遗传和表观遗传变异的功能后果。描述了全基因组关联研究的结果,以及目前努力理解常见疾病中罕见变异的作用,这是在通过应用外显子组测序成功解决孟德尔性状的背景下进行的。讨论了应用功能基因组学来研究基因组和表观基因组,构建调控基因组景观的综合图像,并为疾病关联研究提供信息,以及表达数量性状映射和等位基因特异性基因表达分析的作用。

相似文献

1
Resolving the variable genome and epigenome in human disease.解析人类疾病中的可变基因组和表观基因组。
J Intern Med. 2012 Apr;271(4):379-91. doi: 10.1111/j.1365-2796.2011.02508.x.
2
Genetic and epigenetic contribution to complex traits.遗传和表观遗传对复杂性状的贡献。
Hum Mol Genet. 2012 Oct 15;21(R1):R24-8. doi: 10.1093/hmg/dds383. Epub 2012 Sep 12.
3
Genomic Analysis in the Age of Human Genome Sequencing.人类基因组测序时代的基因组分析。
Cell. 2019 Mar 21;177(1):70-84. doi: 10.1016/j.cell.2019.02.032.
4
Genomic modulators of the immune response.免疫反应的基因组调节剂。
Trends Genet. 2013 Feb;29(2):74-83. doi: 10.1016/j.tig.2012.10.006. Epub 2012 Nov 1.
5
Epigenome-wide association studies for common human diseases.全基因组关联研究常见人类疾病。
Nat Rev Genet. 2011 Jul 12;12(8):529-41. doi: 10.1038/nrg3000.
6
Genetic association of molecular traits: A help to identify causative variants in complex diseases.分子特征的遗传关联:有助于识别复杂疾病中的因果变异。
Clin Genet. 2018 Mar;93(3):520-532. doi: 10.1111/cge.13187.
7
Linkage analysis and the study of Mendelian disease in the era of whole exome and genome sequencing.全外显子组和基因组测序时代的连锁分析与孟德尔疾病研究。
Brief Funct Genomics. 2014 Sep;13(5):378-83. doi: 10.1093/bfgp/elu024. Epub 2014 Jul 14.
8
A comprehensive integrated post-GWAS analysis of Type 1 diabetes reveals enhancer-based immune dysregulation.一项针对 1 型糖尿病的全基因组关联研究后综合分析揭示了基于增强子的免疫失调。
PLoS One. 2021 Sep 16;16(9):e0257265. doi: 10.1371/journal.pone.0257265. eCollection 2021.
9
Epigenomes of Human Hearts Reveal New Genetic Variants Relevant for Cardiac Disease and Phenotype.人类心脏表观基因组揭示与心脏疾病和表型相关的新基因变异。
Circ Res. 2020 Aug 28;127(6):761-777. doi: 10.1161/CIRCRESAHA.120.317254. Epub 2020 Jun 12.
10
Genetic regulatory signatures underlying islet gene expression and type 2 diabetes.胰岛基因表达和2型糖尿病背后的遗传调控特征。
Proc Natl Acad Sci U S A. 2017 Feb 28;114(9):2301-2306. doi: 10.1073/pnas.1621192114. Epub 2017 Feb 13.

引用本文的文献

1
Translating GWAS in rheumatic disease: approaches to establishing mechanism and function for genetic associations with ankylosing spondylitis.翻译风湿性疾病的 GWAS:建立与强直性脊柱炎遗传关联的机制和功能的方法。
Brief Funct Genomics. 2018 Sep 27;17(5):308-318. doi: 10.1093/bfgp/ely015.
2
Genetics of Thyroid-Stimulating Hormone Receptor-Relevance for Autoimmune Thyroid Disease.促甲状腺激素受体的遗传学——与自身免疫性甲状腺疾病的相关性
Front Endocrinol (Lausanne). 2017 Apr 3;8:57. doi: 10.3389/fendo.2017.00057. eCollection 2017.
3
Approaches for establishing the function of regulatory genetic variants involved in disease.鉴定与疾病相关的调控性遗传变异功能的方法。
Genome Med. 2014 Oct 31;6(10):92. doi: 10.1186/s13073-014-0092-4. eCollection 2014.
4
Behavioral Science Research Informs Bioethical Issues in the Conduct of Large-Scale Studies of Children's Disease Risk.行为科学研究为儿童疾病风险大规模研究中的生物伦理问题提供信息。
AJOB Prim Res. 2013 Jan 1;4(3):4-14. doi: 10.1080/21507716.2013.806968.
5
Chromatin and epigenetic features of long-range gene regulation.染色质和长距离基因调控的表观遗传特征。
Nucleic Acids Res. 2013 Aug;41(15):7185-99. doi: 10.1093/nar/gkt499. Epub 2013 Jun 13.
6
From genetics of inflammatory bowel disease towards mechanistic insights.从炎症性肠病的遗传学研究到机制研究的进展。
Trends Immunol. 2013 Aug;34(8):371-8. doi: 10.1016/j.it.2013.04.001. Epub 2013 Apr 30.
7
The impact of 3'UTR variants on differential expression of candidate cancer susceptibility genes.3'UTR 变异对候选癌症易感性基因差异表达的影响。
PLoS One. 2013;8(3):e58609. doi: 10.1371/journal.pone.0058609. Epub 2013 Mar 5.
8
Genomic modulators of the immune response.免疫反应的基因组调节剂。
Trends Genet. 2013 Feb;29(2):74-83. doi: 10.1016/j.tig.2012.10.006. Epub 2012 Nov 1.
9
Epigenetic mechanisms and the development of asthma.表观遗传学机制与哮喘的发生发展。
J Allergy Clin Immunol. 2012 Dec;130(6):1243-55. doi: 10.1016/j.jaci.2012.07.052. Epub 2012 Sep 29.

本文引用的文献

1
Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy.鉴定出影响麻风病易感性的两个新的 IL23R 和 RAB32 基因座。
Nat Genet. 2011 Oct 23;43(12):1247-51. doi: 10.1038/ng.973.
2
Understanding type 1 diabetes through genetics: advances and prospects.从遗传学角度理解 1 型糖尿病:进展与展望。
Nat Rev Genet. 2011 Oct 18;12(11):781-92. doi: 10.1038/nrg3069.
3
Deep resequencing of GWAS loci identifies independent rare variants associated with inflammatory bowel disease.全基因组关联研究位点的深度重测序鉴定出与炎症性肠病相关的独立稀有变异。
Nat Genet. 2011 Oct 9;43(11):1066-73. doi: 10.1038/ng.952.
4
A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.一项针对六个 1 型糖尿病队列的全基因组荟萃分析确定了多个相关位点。
PLoS Genet. 2011 Sep;7(9):e1002293. doi: 10.1371/journal.pgen.1002293. Epub 2011 Sep 29.
5
Genomics reaches the clinic: from basic discoveries to clinical impact.基因组学走向临床:从基础发现到临床影响。
Cell. 2011 Sep 30;147(1):14-6. doi: 10.1016/j.cell.2011.09.012.
6
Genetic risk prediction in complex disease.复杂疾病的遗传风险预测。
Hum Mol Genet. 2011 Oct 15;20(R2):R182-8. doi: 10.1093/hmg/ddr378. Epub 2011 Aug 25.
7
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity.由 DNaseI 和 FAIRE 定义的开放染色质可识别出塑造细胞类型特征的调控元件。
Genome Res. 2011 Oct;21(10):1757-67. doi: 10.1101/gr.121541.111. Epub 2011 Jul 12.
8
Current status of genome-wide association studies in cancer.癌症全基因组关联研究的现状。
Hum Genet. 2011 Jul;130(1):59-78. doi: 10.1007/s00439-011-1030-9. Epub 2011 Jun 16.
9
Comparative studies of de novo assembly tools for next-generation sequencing technologies.新一代测序技术从头组装工具的比较研究。
Bioinformatics. 2011 Aug 1;27(15):2031-7. doi: 10.1093/bioinformatics/btr319. Epub 2011 Jun 2.
10
Pervasive haplotypic variation in the spliceo-transcriptome of the human major histocompatibility complex.人类主要组织相容性复合体剪接转录组中的普遍单倍型变异。
Genome Res. 2011 Jul;21(7):1042-54. doi: 10.1101/gr.116681.110. Epub 2011 May 31.