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本文引用的文献

1
A novel intermediate in the reaction of seleno CYP119 with m-chloroperbenzoic acid.硒代 CYP119 与间氯过苯甲酸反应的一种新中间体。
Biochemistry. 2011 Apr 12;50(14):3014-24. doi: 10.1021/bi101728y. Epub 2011 Mar 22.
2
Spectroscopic characterization of cytochrome P450 Compound I.细胞色素 P450 化合物 I 的光谱特性。
Arch Biochem Biophys. 2011 Mar 1;507(1):44-55. doi: 10.1016/j.abb.2010.12.029. Epub 2010 Dec 30.
3
Cytochrome P450 compound I: capture, characterization, and C-H bond activation kinetics.细胞色素 P450 化合物 I:捕获、表征和 C-H 键活化动力学。
Science. 2010 Nov 12;330(6006):933-7. doi: 10.1126/science.1193478.
4
Structural and biochemical characterization of Mycobacterium tuberculosis CYP142: evidence for multiple cholesterol 27-hydroxylase activities in a human pathogen.结核分枝杆菌 CYP142 的结构和生化特征:人病原体中存在多种胆固醇 27-羟化酶活性的证据。
J Biol Chem. 2010 Dec 3;285(49):38270-82. doi: 10.1074/jbc.M110.164293. Epub 2010 Sep 30.
5
Functional redundancy of steroid C26-monooxygenase activity in Mycobacterium tuberculosis revealed by biochemical and genetic analyses.结核分枝杆菌甾体 C26-单加氧酶活性的功能冗余性的生化和遗传分析。
J Biol Chem. 2010 Nov 19;285(47):36352-60. doi: 10.1074/jbc.M110.161117. Epub 2010 Sep 15.
6
Structure of cytochrome P450 PimD suggests epoxidation of the polyene macrolide pimaricin occurs via a hydroperoxoferric intermediate.细胞色素P450 PimD的结构表明,聚醚大环内酯匹马霉素的环氧化反应是通过氢过氧铁中间体发生的。
Chem Biol. 2010 Aug 27;17(8):841-51. doi: 10.1016/j.chembiol.2010.05.026.
7
Peroxo-iron mediated deformylation in sterol 14alpha-demethylase catalysis.过氧铁介导的甾醇 14α-脱甲基酶催化中的脱甲酰基作用。
J Am Chem Soc. 2010 Aug 4;132(30):10293-305. doi: 10.1021/ja906192b.
8
Mycobacterium tuberculosis CYP125A1, a steroid C27 monooxygenase that detoxifies intracellularly generated cholest-4-en-3-one.结核分枝杆菌 CYP125A1,一种甾体 C27 单加氧酶,可解毒细胞内产生的胆甾-4-烯-3-酮。
Mol Microbiol. 2010 Aug;77(3):730-42. doi: 10.1111/j.1365-2958.2010.07243.x. Epub 2010 Jun 10.
9
Structural characterization of OxyD, a cytochrome P450 involved in beta-hydroxytyrosine formation in vancomycin biosynthesis.结构表征 OxyD,一种参与万古霉素生物合成中β-羟基酪氨酸形成的细胞色素 P450。
J Biol Chem. 2010 Aug 6;285(32):24562-74. doi: 10.1074/jbc.M110.131904. Epub 2010 Jun 1.
10
Oxidation of N-Nitrosoalkylamines by human cytochrome P450 2A6: sequential oxidation to aldehydes and carboxylic acids and analysis of reaction steps.人细胞色素 P450 2A6 对 N-亚硝基烷胺的氧化:醛和羧酸的顺序氧化及反应步骤分析。
J Biol Chem. 2010 Mar 12;285(11):8031-44. doi: 10.1074/jbc.M109.088039. Epub 2010 Jan 8.

细胞色素 P450 铁过氧阴离子的近端配体电子给予和反应性。

Proximal ligand electron donation and reactivity of the cytochrome P450 ferric-peroxo anion.

机构信息

Department of Pharmaceutical Chemistry, University of California, 600 16th Street, San Francisco, California 94158-2517, USA.

出版信息

J Am Chem Soc. 2012 Apr 18;134(15):6673-84. doi: 10.1021/ja211499q. Epub 2012 Apr 4.

DOI:10.1021/ja211499q
PMID:22444582
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3329582/
Abstract

CYP125 from Mycobacterium tuberculosis catalyzes sequential oxidation of the cholesterol side-chain terminal methyl group to the alcohol, aldehyde, and finally acid. Here, we demonstrate that CYP125 simultaneously catalyzes the formation of five other products, all of which result from deformylation of the sterol side chain. The aldehyde intermediate is shown to be the precursor of both the conventional acid metabolite and the five deformylation products. The acid arises by protonation of the ferric-peroxo anion species and formation of the ferryl-oxene species, also known as Compound I, followed by hydrogen abstraction and oxygen transfer. The deformylation products arise by addition of the same ferric-peroxo anion to the aldehyde intermediate to give a peroxyhemiacetal that leads to C-C bond cleavage. This bifurcation of the catalytic sequence has allowed us to examine the effect of electron donation by the proximal ligand on the properties of the ferric-peroxo anion. Replacement of the cysteine thiolate iron ligand by a selenocysteine results in UV-vis, EPR, and resonance Raman spectral changes indicative of an increased electron donation from the proximal selenolate ligand to the iron. Analysis of the product distribution in the reaction of the selenocysteine substituted enzyme reveals a gain in the formation of the acid (Compound I pathway) at the expense of deformylation products. These observations are consistent with an increase in the pK(a) of the ferric-peroxo anion, which favors its protonation and, therefore, Compound I formation.

摘要

结核分枝杆菌中的 CYP125 可催化胆固醇侧链末端甲基的连续氧化,生成醇、醛,最终生成酸。在这里,我们证明 CYP125 同时催化形成了另外 5 种产物,它们均来自固醇侧链的去甲酰化。醛中间体是常规酸代谢产物和 5 种去甲酰化产物的前体。酸的生成是通过铁-过氧阴离子物种的质子化和铁氧烯物种(也称为化合物 I)的形成,随后进行氢原子的提取和氧转移。去甲酰化产物是通过同一铁-过氧阴离子与醛中间体的加成生成过氧半缩醛,导致 C-C 键断裂而产生。这种催化序列的分支允许我们研究近端配体供电子对铁-过氧阴离子性质的影响。用硒代半胱氨酸替代半胱氨酸硫醇铁配体导致紫外-可见、电子顺磁共振和共振拉曼光谱发生变化,表明来自近端硒代酸盐配体的电子供体增加。对硒代半胱氨酸取代酶的反应产物分布的分析表明,酸(化合物 I 途径)的形成增加,而去甲酰化产物减少。这些观察结果与铁-过氧阴离子 pK(a)的增加一致,这有利于其质子化,因此有利于化合物 I 的形成。