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鸭(Anas platyrhynchos)MEF2A 基因 cDNA 的分子克隆与生物信息学分析及其在胚胎发育过程中肌肉组织中的表达谱。

Molecular cloning and in silico analysis of the duck (Anas platyrhynchos) MEF2A gene cDNA and its expression profile in muscle tissues during fetal development.

机构信息

Key Laboratory of Animal Genetic Resources, College of Animal Science and Technology, Sichuan Agricultural University, Ya'an, Sichuan, P.R. China.

出版信息

Genet Mol Biol. 2012 Jan;35(1):182-90. doi: 10.1590/s1415-47572012005000023. Epub 2012 Feb 16.

Abstract

The role of myogenic enhancer transcription factor 2a (MEF2A) in avian muscle during fetal development is unknown. In this work, we cloned the duck MEF2A cDNA sequence (GenBank accession no. HM460752) and examined its developmental expression profiles in cardiac muscle, non-vascular smooth muscle and skeletal muscle. Duck MEF2A cDNA comprised 1479 bp encoding 492 amino acid residues. In silico analysis showed that MEF2A contained MADS (MCM1, AGAMOUS, DEFICIENS and SRF - serum response factor), MEF2 and mitogen-activated protein kinase (MAPK) transcription domains with high homology to related proteins in other species. Modified sites in these domains were conserved among species and several variants were found. Quantitative PCR showed that MEF2A was expressed in all three muscles at each developmental stage examined, with the expression in smooth muscle being higher than in the other muscles. These results indicate that the conserved domains of duck MEF2A, including the MADS and MEF2 domains, are important for MEF2A transcription factor function. The expression of MEF2A in duck smooth muscle and cardiac muscle suggests that MEF2A plays a role in these two tissues.

摘要

在禽类胚胎发育过程中,肌源性增强因子 2A(MEF2A)在肌肉中的作用尚不清楚。本研究克隆了鸭 MEF2A cDNA 序列(GenBank 登录号:HM460752),并检测了其在心肌、非血管平滑肌和骨骼肌中的发育表达谱。鸭 MEF2A cDNA 全长 1479bp,编码 492 个氨基酸残基。序列分析显示,MEF2A 含有 MADS(MCM1、AGAMOUS、DEFICIENS 和 SRF-血清反应因子)、MEF2 和丝裂原激活蛋白激酶(MAPK)转录结构域,与其他物种的相关蛋白具有高度同源性。这些结构域中的修饰位点在物种间保守,并发现了几种变体。定量 PCR 结果表明,在所检测的三个发育阶段的三种肌肉中均有 MEF2A 表达,平滑肌中的表达高于其他肌肉。这些结果表明,鸭 MEF2A 的保守结构域,包括 MADS 和 MEF2 结构域,对于 MEF2A 转录因子功能很重要。MEF2A 在鸭平滑肌和心肌中的表达提示 MEF2A 在这两种组织中发挥作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b49d/3313510/59859134b907/gmb-35-1-182-gfig1.jpg

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