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Characterization of Ligand Binding by Saturation Transfer Difference NMR Spectroscopy.通过饱和转移差核磁共振波谱法对配体结合进行表征
Angew Chem Int Ed Engl. 1999 Jun 14;38(12):1784-1788. doi: 10.1002/(SICI)1521-3773(19990614)38:12<1784::AID-ANIE1784>3.0.CO;2-Q.
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Synthesis of three trisaccharide congeners to investigate frame shifting of β1,2-mannan homo-oligomers in an antibody binding site.合成三种三糖同系物,以研究抗体结合位中β1,2-甘露聚糖同寡聚物的移框。
Carbohydr Res. 2012 Aug 1;357:7-15. doi: 10.1016/j.carres.2012.03.019. Epub 2012 Apr 27.
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Close-up of the immunogenic α1,3-galactose epitope as defined by a monoclonal chimeric immunoglobulin E and human serum using saturation transfer difference (STD) NMR.使用饱和转移差异(STD)NMR 研究单克隆嵌合免疫球蛋白 E 和人血清定义的免疫原性α1,3-半乳糖表位的特写。
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The contribution of mouse models to our understanding of systemic candidiasis.小鼠模型对系统性念珠菌病认识的贡献。
FEMS Microbiol Lett. 2011 Jul;320(1):1-8. doi: 10.1111/j.1574-6968.2011.02262.x. Epub 2011 Mar 24.
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Prospects for development of a vaccine to prevent and control vaginal candidiasis.预防和控制阴道念珠菌病疫苗的发展前景。
Curr Infect Dis Rep. 2011 Feb;13(1):102-7. doi: 10.1007/s11908-010-0143-y.
6
Synthesis of monodeoxy and mono-O-methyl congeners of methyl beta-D-mannopyranosyl-(1-->2)-beta-D-mannopyranoside for epitope mapping of anti-Candida albicans antibodies.合成甲基-β-D-甘露吡喃糖基-(1→2)-β-D-甘露吡喃糖苷的单脱氧和单-O-甲基类似物用于抗白色念珠菌抗体的表位作图。
Carbohydr Res. 2009 Aug 17;344(12):1397-411. doi: 10.1016/j.carres.2009.07.008. Epub 2009 Jul 25.
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AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading.AutoDock Vina:通过新的评分函数、高效优化和多线程改进对接的速度和准确性。
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Synthetic glycopeptide vaccines combining beta-mannan and peptide epitopes induce protection against candidiasis.结合β-甘露聚糖和肽表位的合成糖肽疫苗可诱导针对念珠菌病的保护作用。
Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13526-31. doi: 10.1073/pnas.0803195105. Epub 2008 Aug 25.
9
Synthesis and immunochemical studies on a Candida albicans cluster glycoconjugate vaccine.白色念珠菌簇糖缀合物疫苗的合成与免疫化学研究
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GLYCAM06: a generalizable biomolecular force field. Carbohydrates.GLYCAM06:一种可推广的生物分子力场。碳水化合物。
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通过一种保护性单克隆抗体对白色念珠菌(1->2)-β-甘露聚糖寡糖的分子识别揭示了内部糖残基的免疫显性。

Molecular recognition of Candida albicans (1->2)-β-mannan oligosaccharides by a protective monoclonal antibody reveals the immunodominance of internal saccharide residues.

机构信息

Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada.

出版信息

J Biol Chem. 2012 May 25;287(22):18078-90. doi: 10.1074/jbc.M112.355578. Epub 2012 Apr 5.

DOI:10.1074/jbc.M112.355578
PMID:22493450
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3365708/
Abstract

A self-consistent model of β-mannan oligosaccharides bound to a monoclonal antibody, C3.1, that protects mice against Candida albicans has been developed through chemical mapping, NMR spectroscopic, and computational studies. This antibody optimally binds di- and trisaccharide epitopes, whereas larger oligomers bind with affinities that markedly decrease with increasing chain length. The (1→2)-β-linked di-, tri-, and tetramannosides bind in helical conformations similar to the solution global minimum. Antibody recognition of the di- and trisaccharide is primarily dependent on the mannose unit at the reducing end, with the hydrophobic face of this sugar being tightly bound. Recognition of a tetrasaccharide involves a frameshift in the ligand interaction, shown by strong binding of the sugar adjacent to the reducing end. We show that frameshifting may also be deliberately induced by chemical modifications. Molecular recognition patterns similar to that of mAb C3.1, determined by saturation transfer difference-NMR, were also observed in polyclonal sera from rabbits immunized with a trisaccharide glycoconjugate. The latter observation points to the importance of internal residues as immunodominant epitopes in (1→2)-β-mannans and to the viability of a glycoconjugate vaccine composed of a minimal length oligosaccharide hapten.

摘要

通过化学绘图、NMR 光谱和计算研究,开发了一种与单克隆抗体 C3.1 结合的β-甘露聚糖低聚糖的自洽模型,该抗体可保护小鼠免受白色念珠菌的侵害。该抗体最适结合二糖和三糖表位,而较大的寡糖与亲和力结合,随着链长的增加而明显降低。(1→2)-β 连接的二、三、四甘露糖苷以与溶液整体最小能量相似的螺旋构象结合。抗体对二糖和三糖的识别主要依赖于还原末端的甘露糖单元,该糖的疏水面被紧密结合。四糖的识别涉及配体相互作用的移码,通过与还原末端相邻的糖的强结合来显示。我们表明,化学修饰也可能故意诱导移码。通过饱和转移差异-NMR 确定的与 mAb C3.1 相似的分子识别模式,也在用三糖糖缀合物免疫的兔子的多克隆血清中观察到。后一种观察结果表明,内部残基作为(1→2)-β-甘露聚糖中的免疫显性表位以及由最小长度寡糖半抗原组成的糖缀合物疫苗的重要性。