• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

梅毒密螺旋体两种周质脂蛋白相互作用的结构和热力学特征,这两种脂蛋白是 TPR 蛋白相关 TRAP 转运体(TPAT)的组成部分。

Structural and thermodynamic characterization of the interaction between two periplasmic Treponema pallidum lipoproteins that are components of a TPR-protein-associated TRAP transporter (TPAT).

机构信息

Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.

出版信息

J Mol Biol. 2012 Jun 29;420(1-2):70-86. doi: 10.1016/j.jmb.2012.04.001. Epub 2012 Apr 11.

DOI:10.1016/j.jmb.2012.04.001
PMID:22504226
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3367087/
Abstract

Tripartite ATP-independent periplasmic transporters (TRAP-Ts) are bacterial transport systems that have been implicated in the import of small molecules into the cytoplasm. A newly discovered subfamily of TRAP-Ts [tetratricopeptide repeat-protein associated TRAP transporters (TPATs)] has four components. Three are common to both TRAP-Ts and TPATs: the P component, a ligand-binding protein, and a transmembrane symporter apparatus comprising the M and Q components (M and Q are sometimes fused to form a single polypeptide). TPATs are distinguished from TRAP-Ts by the presence of a unique protein called the "T component". In Treponema pallidum, this protein (TatT) is a water-soluble trimer whose protomers are each perforated by a pore. Its respective P component (TatP(T)) interacts with the TatT in vitro and in vivo. In this work, we further characterized this interaction. Co-crystal structures of two complexes between the two proteins confirm that up to three monomers of TatP(T) can bind to the TatT trimer. A putative ligand-binding cleft of TatP(T) aligns with the pore of TatT, strongly suggesting ligand transfer between T and P(T). We used a combination of site-directed mutagenesis and analytical ultracentrifugation to derive thermodynamic parameters for the interactions. These observations confirm that the observed crystallographic interface is recapitulated in solution. These results prompt a hypothesis of the molecular mechanism(s) of hydrophobic ligand transport by the TPATs.

摘要

三磷酸腺苷非依赖型周质转运蛋白(TRAP-Ts)是一类参与小分子向细胞质内转运的细菌转运系统。最近发现的 TRAP-Ts 的一个亚家族[四肽重复蛋白相关 TRAP 转运蛋白(TPATs)]有四个组成部分。其中三个组件在 TRAP-Ts 和 TPATs 中是共同的:配体结合蛋白 P 组件,以及由 M 和 Q 组件组成的跨膜共转运体装置(M 和 Q 有时融合形成单一多肽)。TPATs 与 TRAP-Ts 的区别在于存在一种独特的蛋白,称为“T 组件”。在苍白密螺旋体中,这种蛋白(TatT)是一种水溶性三聚体,其原体均被一个孔穿孔。它相应的 P 组件(TatP(T))在体外和体内与 TatT 相互作用。在这项工作中,我们进一步研究了这种相互作用。两个蛋白之间的两个复合物的共晶结构证实,多达三个 TatP(T)单体可以与 TatT 三聚体结合。TatP(T)的一个假定配体结合裂隙与 TatT 的孔对齐,强烈表明 T 和 P(T)之间的配体转移。我们使用定点突变和分析超速离心法来推导相互作用的热力学参数。这些观察结果证实了观察到的晶体学界面在溶液中得到了重现。这些结果提示了 TPATs 进行疏水性配体转运的分子机制假说。

相似文献

1
Structural and thermodynamic characterization of the interaction between two periplasmic Treponema pallidum lipoproteins that are components of a TPR-protein-associated TRAP transporter (TPAT).梅毒密螺旋体两种周质脂蛋白相互作用的结构和热力学特征,这两种脂蛋白是 TPR 蛋白相关 TRAP 转运体(TPAT)的组成部分。
J Mol Biol. 2012 Jun 29;420(1-2):70-86. doi: 10.1016/j.jmb.2012.04.001. Epub 2012 Apr 11.
2
Structural, bioinformatic, and in vivo analyses of two Treponema pallidum lipoproteins reveal a unique TRAP transporter.结构、生物信息学和体内分析两种梅毒密螺旋体脂蛋白揭示了一种独特的 TRAP 转运体。
J Mol Biol. 2012 Mar 9;416(5):678-96. doi: 10.1016/j.jmb.2012.01.015. Epub 2012 Jan 27.
3
Functional clues from the crystal structure of an orphan periplasmic ligand-binding protein from Treponema pallidum.来自梅毒螺旋体一种孤儿周质配体结合蛋白晶体结构的功能线索
Protein Sci. 2017 Apr;26(4):847-856. doi: 10.1002/pro.3133. Epub 2017 Mar 23.
4
Crystal structure of the Tp34 (TP0971) lipoprotein of treponema pallidum: implications of its metal-bound state and affinity for human lactoferrin.梅毒螺旋体Tp34(TP0971)脂蛋白的晶体结构:其金属结合状态及对人乳铁蛋白亲和力的意义
J Biol Chem. 2007 Feb 23;282(8):5944-58. doi: 10.1074/jbc.M610215200. Epub 2006 Dec 27.
5
Similarity between the 38-kilodalton lipoprotein of Treponema pallidum and the glucose/galactose-binding (MglB) protein of Escherichia coli.梅毒螺旋体38千道尔顿脂蛋白与大肠杆菌葡萄糖/半乳糖结合蛋白(MglB)之间的相似性。
Infect Immun. 1994 Apr;62(4):1381-91. doi: 10.1128/iai.62.4.1381-1391.1994.
6
Structural Modeling of the Treponema pallidum Outer Membrane Protein Repertoire: a Road Map for Deconvolution of Syphilis Pathogenesis and Development of a Syphilis Vaccine.梅毒密螺旋体外膜蛋白组的结构建模:梅毒发病机制解析与梅毒疫苗开发的路线图。
J Bacteriol. 2021 Jul 8;203(15):e0008221. doi: 10.1128/JB.00082-21.
7
Structural and biochemical basis for polyamine binding to the Tp0655 lipoprotein of Treponema pallidum: putative role for Tp0655 (TpPotD) as a polyamine receptor.多胺与梅毒螺旋体Tp0655脂蛋白结合的结构和生化基础:Tp0655(TpPotD)作为多胺受体的假定作用
J Mol Biol. 2007 Oct 26;373(3):681-94. doi: 10.1016/j.jmb.2007.08.018. Epub 2007 Aug 21.
8
Treponema pallidum TroA is a periplasmic zinc-binding protein with a helical backbone.梅毒螺旋体TroA是一种具有螺旋状主链的周质锌结合蛋白。
Nat Struct Biol. 1999 Jul;6(7):628-33. doi: 10.1038/10677.
9
Molecular characterization and cellular localization of TpLRR, a processed leucine-rich repeat protein of Treponema pallidum, the syphilis spirochete.梅毒螺旋体(苍白密螺旋体)加工后的富含亮氨酸重复序列蛋白TpLRR的分子特征及细胞定位
J Bacteriol. 1997 May;179(10):3188-95. doi: 10.1128/jb.179.10.3188-3195.1997.
10
The transition from closed to open conformation of Treponema pallidum outer membrane-associated lipoprotein TP0453 involves membrane sensing and integration by two amphipathic helices.梅毒密螺旋体外膜相关脂蛋白 TP0453 从封闭构象到开放构象的转变涉及通过两条两亲性螺旋的膜感应和整合。
J Biol Chem. 2011 Dec 2;286(48):41656-41668. doi: 10.1074/jbc.M111.305284. Epub 2011 Sep 29.

引用本文的文献

1
Atmospheric methane consumption in arid ecosystems acts as a reverse chimney and is accelerated by plant-methanotroph biomes.干旱生态系统中的大气甲烷消耗起到了反向烟囱的作用,并因植物-甲烷氧化菌生物群落而加速。
ISME J. 2025 Jan 2;19(1). doi: 10.1093/ismejo/wraf026.
2
Biophysical and biochemical evidence for the role of acetate kinases (AckAs) in an acetogenic pathway in pathogenic spirochetes.乙酸激酶(AckAs)在致病性螺旋体产乙酸途径中作用的生物物理和生化证据。
PLoS One. 2025 Jan 9;20(1):e0312642. doi: 10.1371/journal.pone.0312642. eCollection 2025.
3
Lipid Trafficking in Diverse Bacteria.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
In the wake of Guatemala: the case for voluntary compensation and remediation.危地马拉案之后:自愿赔偿与补救的理由。
Am J Public Health. 2012 Feb;102(2):e4-6. doi: 10.2105/AJPH.2011.300543. Epub 2011 Dec 15.
3
Structural, bioinformatic, and in vivo analyses of two Treponema pallidum lipoproteins reveal a unique TRAP transporter.结构、生物信息学和体内分析两种梅毒密螺旋体脂蛋白揭示了一种独特的 TRAP 转运体。
不同细菌中的脂质转运
Acc Chem Res. 2025 Jan 7;58(1):36-46. doi: 10.1021/acs.accounts.4c00540. Epub 2024 Dec 16.
4
Novel sterol binding domains in bacteria.细菌中的新型固醇结合结构域。
Elife. 2024 Feb 8;12:RP90696. doi: 10.7554/eLife.90696.
5
Membrane-anchored substrate binding proteins are deployed in secondary TAXI transporters.膜锚定基质结合蛋白被部署在二级 TAXI 转运体中。
Biol Chem. 2023 Mar 15;404(7):715-725. doi: 10.1515/hsz-2022-0337. Print 2023 Jun 27.
6
Structural Modeling of the Treponema pallidum Outer Membrane Protein Repertoire: a Road Map for Deconvolution of Syphilis Pathogenesis and Development of a Syphilis Vaccine.梅毒密螺旋体外膜蛋白组的结构建模:梅毒发病机制解析与梅毒疫苗开发的路线图。
J Bacteriol. 2021 Jul 8;203(15):e0008221. doi: 10.1128/JB.00082-21.
7
Biophysical and Biochemical Characterization of TP0037, a d-Lactate Dehydrogenase, Supports an Acetogenic Energy Conservation Pathway in Treponema pallidum.TP0037(一种 d-乳酸脱氢酶)的物理生化特性分析支持苍白密螺旋体的产乙酸能保守途径。
mBio. 2020 Sep 22;11(5):e02249-20. doi: 10.1128/mBio.02249-20.
8
Functional insights from proteome-wide structural modeling of Treponema pallidum subspecies pallidum, the causative agent of syphilis.梅毒病原体梅毒螺旋体苍白亚种全蛋白质组结构建模的功能见解。
BMC Struct Biol. 2018 May 16;18(1):7. doi: 10.1186/s12900-018-0086-3.
9
Tripartite ATP-Independent Periplasmic (TRAP) Transporters and Tripartite Tricarboxylate Transporters (TTT): From Uptake to Pathogenicity.三磷酸腺苷非依赖周质(TRAP)转运蛋白和三羧酸转运蛋白(TTT):从摄取到致病性。
Front Cell Infect Microbiol. 2018 Feb 12;8:33. doi: 10.3389/fcimb.2018.00033. eCollection 2018.
10
Syphilis.梅毒。
Nat Rev Dis Primers. 2017 Oct 12;3:17073. doi: 10.1038/nrdp.2017.73.
J Mol Biol. 2012 Mar 9;416(5):678-96. doi: 10.1016/j.jmb.2012.01.015. Epub 2012 Jan 27.
4
Genetic diversity in Treponema pallidum: implications for pathogenesis, evolution and molecular diagnostics of syphilis and yaws.梅毒螺旋体的遗传多样性:对梅毒和雅司病发病机制、进化和分子诊断的影响。
Infect Genet Evol. 2012 Mar;12(2):191-202. doi: 10.1016/j.meegid.2011.12.001. Epub 2011 Dec 15.
5
The membrane proteins SiaQ and SiaM form an essential stoichiometric complex in the sialic acid tripartite ATP-independent periplasmic (TRAP) transporter SiaPQM (VC1777-1779) from Vibrio cholerae.膜蛋白 SiaQ 和 SiaM 在霍乱弧菌的唾液酸三组分 ATP 非依赖性周质(TRAP)转运蛋白 SiaPQM(VC1777-1779)中形成一个必需的化学计量复合物。
J Biol Chem. 2012 Jan 27;287(5):3598-608. doi: 10.1074/jbc.M111.281030. Epub 2011 Dec 13.
6
Syphilis: using modern approaches to understand an old disease.梅毒:用现代方法理解古老疾病。
J Clin Invest. 2011 Dec;121(12):4584-92. doi: 10.1172/JCI57173. Epub 2011 Dec 1.
7
Lipoprotein sorting in bacteria.细菌中的脂蛋白分拣。
Annu Rev Microbiol. 2011;65:239-59. doi: 10.1146/annurev-micro-090110-102859.
8
Ligand-gated diffusion across the bacterial outer membrane.配体门控扩散穿过细菌外膜。
Proc Natl Acad Sci U S A. 2011 Jun 21;108(25):10121-6. doi: 10.1073/pnas.1018532108. Epub 2011 May 18.
9
Crystal structure of the maltose transporter in a pretranslocation intermediate state.麦芽糖转运蛋白在易位前中间态的晶体结构。
Science. 2011 Jun 3;332(6034):1202-5. doi: 10.1126/science.1200767. Epub 2011 May 12.
10
Transcriptional profiling of the marine oil-degrading bacterium Alcanivorax borkumensis during growth on n-alkanes.海洋石油降解菌 Alcanivorax borkumensis 在生长过程中对正烷烃的转录谱分析。
FEMS Microbiol Lett. 2011 Jun;319(2):160-8. doi: 10.1111/j.1574-6968.2011.02279.x. Epub 2011 Apr 20.