Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
J Mol Biol. 2012 Jun 29;420(1-2):70-86. doi: 10.1016/j.jmb.2012.04.001. Epub 2012 Apr 11.
Tripartite ATP-independent periplasmic transporters (TRAP-Ts) are bacterial transport systems that have been implicated in the import of small molecules into the cytoplasm. A newly discovered subfamily of TRAP-Ts [tetratricopeptide repeat-protein associated TRAP transporters (TPATs)] has four components. Three are common to both TRAP-Ts and TPATs: the P component, a ligand-binding protein, and a transmembrane symporter apparatus comprising the M and Q components (M and Q are sometimes fused to form a single polypeptide). TPATs are distinguished from TRAP-Ts by the presence of a unique protein called the "T component". In Treponema pallidum, this protein (TatT) is a water-soluble trimer whose protomers are each perforated by a pore. Its respective P component (TatP(T)) interacts with the TatT in vitro and in vivo. In this work, we further characterized this interaction. Co-crystal structures of two complexes between the two proteins confirm that up to three monomers of TatP(T) can bind to the TatT trimer. A putative ligand-binding cleft of TatP(T) aligns with the pore of TatT, strongly suggesting ligand transfer between T and P(T). We used a combination of site-directed mutagenesis and analytical ultracentrifugation to derive thermodynamic parameters for the interactions. These observations confirm that the observed crystallographic interface is recapitulated in solution. These results prompt a hypothesis of the molecular mechanism(s) of hydrophobic ligand transport by the TPATs.
三磷酸腺苷非依赖型周质转运蛋白(TRAP-Ts)是一类参与小分子向细胞质内转运的细菌转运系统。最近发现的 TRAP-Ts 的一个亚家族[四肽重复蛋白相关 TRAP 转运蛋白(TPATs)]有四个组成部分。其中三个组件在 TRAP-Ts 和 TPATs 中是共同的:配体结合蛋白 P 组件,以及由 M 和 Q 组件组成的跨膜共转运体装置(M 和 Q 有时融合形成单一多肽)。TPATs 与 TRAP-Ts 的区别在于存在一种独特的蛋白,称为“T 组件”。在苍白密螺旋体中,这种蛋白(TatT)是一种水溶性三聚体,其原体均被一个孔穿孔。它相应的 P 组件(TatP(T))在体外和体内与 TatT 相互作用。在这项工作中,我们进一步研究了这种相互作用。两个蛋白之间的两个复合物的共晶结构证实,多达三个 TatP(T)单体可以与 TatT 三聚体结合。TatP(T)的一个假定配体结合裂隙与 TatT 的孔对齐,强烈表明 T 和 P(T)之间的配体转移。我们使用定点突变和分析超速离心法来推导相互作用的热力学参数。这些观察结果证实了观察到的晶体学界面在溶液中得到了重现。这些结果提示了 TPATs 进行疏水性配体转运的分子机制假说。