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肠出血性大肠杆菌质粒 pO157_2 的完整 DNA 序列分析在β-葡萄糖醛酸酶阳性大肠杆菌 O157:H7 中揭示了一种新的进化途径。

Complete DNA sequence analysis of enterohemorrhagic Escherichia coli plasmid pO157_2 in β-glucuronidase-positive E. coli O157:H7 reveals a novel evolutionary path.

机构信息

Department of Nutrition and Food Science, University of Maryland, College Park, Maryland, USA.

出版信息

J Bacteriol. 2012 Jul;194(13):3457-63. doi: 10.1128/JB.00197-12. Epub 2012 Apr 20.

Abstract

Strains of enterohemorragic Escherichia coli (EHEC) O157:H7 that are non-sorbitol fermenting (NSF) and β-glucuronidase negative (GUD(-)) carry a large virulence plasmid, pO157 (>90,000 bp), whereas closely related sorbitol-fermenting (SF) E. coli O157:H(-) strains carry plasmid pSFO157 (>120,000 bp). GUD(+) NSF O157:H7 strains are presumed to be precursors of GUD(-) NSF O157:H7 strains that also carry pO157. In this study, we report the complete sequence of a novel virulence plasmid, pO157-2 (89,762 bp), isolated from GUD(+) NSF O157:H7 strain G5101. PCR analysis confirmed the presence of pO157-2 in six other strains of GUD(+) NSF O157:H7. pO157-2 carries genes associated with virulence (e.g., hemolysin genes) and conjugation (tra and trb genes) but lacks katP and espP present in pO157. Comparative analysis of the three EHEC plasmids shows that pO157-2 is highly related to pO157 and pSFO157 but not ancestral to pO157. These results indicated that GUD(+) NSF O157:H7 strains might not be direct precursors to GUD(-) NSF O157:H7 as previously proposed but rather have evolved independently from a common ancestor.

摘要

产肠出血性大肠杆菌(EHEC)O157:H7 的菌株,如果是非山梨醇发酵(NSF)和β-葡萄糖醛酸酶阴性(GUD(-)),则携带一个大型毒力质粒 pO157(>90000bp),而密切相关的山梨醇发酵(SF)E. coli O157:H(-)菌株携带质粒 pSFO157(>120000bp)。假定 GUD(+)NSF O157:H7 菌株是携带 pO157 的 GUD(-)NSF O157:H7 菌株的前体。在这项研究中,我们报告了一种新型毒力质粒 pO157-2(89762bp)的完整序列,该质粒从 GUD(+)NSF O157:H7 菌株 G5101 中分离得到。PCR 分析证实了另外 6 株 GUD(+)NSF O157:H7 菌株中存在 pO157-2。pO157-2 携带与毒力(例如溶血素基因)和 conjugation(tra 和 trb 基因)相关的基因,但缺乏 pO157 中存在的 katP 和 espP。对这三种 EHEC 质粒的比较分析表明,pO157-2 与 pO157 和 pSFO157 高度相关,但与 pO157 不同源。这些结果表明,GUD(+)NSF O157:H7 菌株可能不是以前提出的 GUD(-)NSF O157:H7 的直接前体,而是从一个共同的祖先独立进化而来的。

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本文引用的文献

3
Derivation of Escherichia coli O157:H7 from its O55:H7 precursor.
PLoS One. 2010 Jan 14;5(1):e8700. doi: 10.1371/journal.pone.0008700.
5
The National Center for Biotechnology Information's Protein Clusters Database.
Nucleic Acids Res. 2009 Jan;37(Database issue):D216-23. doi: 10.1093/nar/gkn734. Epub 2008 Oct 21.
6
All blood, no stool: enterohemorrhagic Escherichia coli O157:H7 infection.
J Vet Sci. 2008 Sep;9(3):219-31. doi: 10.4142/jvs.2008.9.3.219.
7
Genetic diversity among clonal lineages within Escherichia coli O157:H7 stepwise evolutionary model.
Emerg Infect Dis. 2007 Nov;13(11):1701-6. doi: 10.3201/eid1311.070381.
8
9
Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7.
J Bacteriol. 2005 Mar;187(5):1783-91. doi: 10.1128/JB.187.5.1783-1791.2005.
10
Circular genome visualization and exploration using CGView.
Bioinformatics. 2005 Feb 15;21(4):537-9. doi: 10.1093/bioinformatics/bti054. Epub 2004 Oct 12.

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