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基于叶绿体和核 DNA 序列联合分析推断神秘濒危属三叶筋骨草(虎耳草科)的系统发育位置。

Phylogenetic placement of the enigmatic and critically endangered genus Saniculiphyllum (Saxifragaceae) inferred from combined analysis of plastid and nuclear DNA sequences.

机构信息

Key Laboratory of Biodiversity and Biogeography, Kunming Institute of Botany, Chinese Academy of Sciences, No. 132, Lanhei Road, Kunming, Yunnan 650201, PR China.

出版信息

Mol Phylogenet Evol. 2012 Aug;64(2):357-67. doi: 10.1016/j.ympev.2012.04.010. Epub 2012 Apr 24.

Abstract

Saniculiphyllum, a monotypic genus distributed in Southwest China, was thought to be extinct before our recent rediscovery. The taxonomic position of this genus has been enigmatic ever since its publication. It was originally treated as the only member of a distinct tribe Saniculiphylleae in the family Saxifragaceae. Some proposed a new family, Saniculophyllaceae, to accommodate this genus, although its affinities are clearly with members of Saxifragaceae. Here we analyzed six DNA regions, the nuclear ribosomal ITS and 26S rDNA and the plastid rbcL, matK, trnL-trnF, psbA-trnH genes, spacers, and intron to explore the phylogenetic position of Saniculiphyllum within Saxifragaceae. The combined nuclear and chloroplast dataset includes 63 ingroup species, representing all genera but Hieronymusia in the family. Results from likelihood, parsimony and Bayesian phylogenetic methods corroborate earlier results. Two clades of Saxifragaceae, the Heucheroid and Saxifragoid clades, were recovered. The topologies obtained from different analyses confirm the placement of Saniculiphyllum in Saxifragaceae, but our analyses reveal that Saniculiphyllum is embedded within the large Heucheroid clade. However, the closest relatives of Saniculiphyllum within the Heucheroid clade remain unclear. Combined with morphological data, our results suggest that Saniculiphyllum should best be regarded as a highly distinctive lineage within the Heucheroid clade of Saxifragaceae. Morphological novelties and conservation status of Saniculiphyllum are also presented.

摘要

四川鱼鳞草,一个分布在中国西南部的单种属,在我们最近重新发现之前,被认为已经灭绝。自从该属发表以来,其分类位置一直是个谜。它最初被视为卫矛科一个独特的鱼鳞草族(Saniculiphylleae)的唯一成员。有人提出了一个新科——鱼鳞草科(Saniculophyllaceae)来容纳这个属,尽管它与卫矛科的成员关系明显。在这里,我们分析了六个 DNA 区域,核核糖体 ITS 和 26S rDNA 以及质体 rbcL、matK、trnL-trnF、psbA-trnH 基因、间隔区和内含子,以探讨四川鱼鳞草在卫矛科中的系统发育位置。联合核和叶绿体数据集包括 63 个内类群物种,代表了该科中的除 Hieronymusia 属外的所有属。似然、简约和贝叶斯系统发育方法的结果证实了早期的结果。卫矛科的两个分支,即虎耳草分支和卫矛分支,得到了恢复。不同分析得到的拓扑结构证实了四川鱼鳞草在卫矛科中的位置,但我们的分析表明,四川鱼鳞草嵌入在大型虎耳草分支中。然而,四川鱼鳞草在虎耳草分支中的最近亲缘关系尚不清楚。结合形态数据,我们的结果表明,四川鱼鳞草最好被视为卫矛科虎耳草分支中的一个高度独特的谱系。还介绍了四川鱼鳞草的形态新颖性和保护状况。

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