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一种用于非线性校准问题的稳健贝叶斯随机效应模型。

A robust bayesian random effects model for nonlinear calibration problems.

作者信息

Fong Y, Wakefield J, De Rosa S, Frahm N

机构信息

Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.

出版信息

Biometrics. 2012 Dec;68(4):1103-12. doi: 10.1111/j.1541-0420.2012.01762.x. Epub 2012 May 2.

Abstract

In the context of a bioassay or an immunoassay, calibration means fitting a curve, usually nonlinear, through the observations collected on a set of samples containing known concentrations of a target substance, and then using the fitted curve and observations collected on samples of interest to predict the concentrations of the target substance in these samples. Recent technological advances have greatly improved our ability to quantify minute amounts of substance from a tiny volume of biological sample. This has in turn led to a need to improve statistical methods for calibration. In this article, we focus on developing calibration methods robust to dependent outliers. We introduce a novel normal mixture model with dependent error terms to model the experimental noise. In addition, we propose a reparameterization of the five parameter logistic nonlinear regression model that allows us to better incorporate prior information. We examine the performance of our methods with simulation studies and show that they lead to a substantial increase in performance measured in terms of mean squared error of estimation and a measure of the average prediction accuracy. A real data example from the HIV Vaccine Trials Network Laboratory is used to illustrate the methods.

摘要

在生物测定或免疫测定的背景下,校准意味着通过对一组含有已知浓度目标物质的样本进行观测,拟合出一条通常为非线性的曲线,然后使用拟合曲线以及对感兴趣样本的观测来预测这些样本中目标物质的浓度。最近的技术进步极大地提高了我们从微量生物样本中定量分析微量物质的能力。这反过来又导致需要改进校准的统计方法。在本文中,我们专注于开发对相关异常值具有鲁棒性的校准方法。我们引入了一种具有相关误差项的新型正态混合模型来对实验噪声进行建模。此外,我们提出了一种对五参数逻辑非线性回归模型的重新参数化方法,使我们能够更好地纳入先验信息。我们通过模拟研究来检验我们方法的性能,并表明这些方法在估计均方误差和平均预测准确性度量方面能显著提高性能。来自HIV疫苗试验网络实验室的一个实际数据示例用于说明这些方法。

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Bayesian inference for generalized linear mixed models.贝叶斯推断在广义线性混合模型中的应用。
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