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鉴定 Marineobacter lipolyticus 脂肪酶 LipBL 水解活性相关的氨基酸。

Identification of amino acids involved in the hydrolytic activity of lipase LipBL from Marinobacter lipolyticus.

机构信息

Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain.

Institute for Molecular Enzyme Technology, Heinrich-Heine University, Düsseldorf, Forschungszentrum Jülich, Germany.

出版信息

Microbiology (Reading). 2012 Aug;158(Pt 8):2192-2203. doi: 10.1099/mic.0.058792-0. Epub 2012 May 18.

DOI:10.1099/mic.0.058792-0
PMID:22609754
Abstract

The lipolytic enzyme family VIII currently includes only seven members but represents a group of lipolytic enzymes with interesting properties. Recently, we identified a gene encoding the family VIII lipase LipBL from the halophilic bacterium Marinobacter lipolyticus. This enzyme, like most lipolytic enzymes from family VIII, possesses two possible nucleophilic serines located in an S-X-X-K β-lactamase motif and a G-X-S-X-G lipase motif. The serine in the S-X-X-K motif is a catalytic residue, but the role of serine within the common lipase consensus sequence G-X-S-X-G has not yet been systematically studied. Here, the previously reported time-intensive procedure for purification of recombinant LipBL was replaced by one-step metal-affinity chromatography purification in the presence of ATP. Heterologous co-expression of His(6)-tagged LipBL with the cytoplasmic molecular chaperones GroEL/GroES was necessary to obtain catalytically active LipBL. Site-directed mutagenesis performed to map the active site of LipBL revealed that mutation of serine and lysine in the β-lactamase motif (S(72)-M-T-K(75)) to alanine abolished the enzyme activity of LipBL, in contrast to mutation of the serine in the lipase consensus motif (S321A). Furthermore, mutagenesis was performed to understand the role of the G-X-S-X-G motif and other amino acids that are conserved among family VIII esterases. We describe how mutations in the conserved G-X-S-X-G motif altered the biochemical properties and substrate specificity of LipBL. Molecular modelling results indicate the location of the G-X-S(321)-X-G motif in a loop close to the catalytic centre of LipBL, presumably representing a substrate-binding site of LipBL.

摘要

脂肪酶家族 VIII 目前仅包括七个成员,但代表了一组具有有趣特性的脂肪酶。最近,我们从嗜盐菌 Marinobacter lipolyticus 中鉴定出一个编码家族 VIII 脂肪酶 LipBL 的基因。与家族 VIII 的大多数脂肪酶一样,该酶具有两个可能的亲核丝氨酸,位于 S-X-X-K β-内酰胺酶基序和 G-X-S-X-G 脂肪酶基序中。S-X-X-K 基序中的丝氨酸是催化残基,但 G-X-S-X-G 常见脂肪酶保守序列中丝氨酸的作用尚未得到系统研究。在这里,我们用一步金属亲和层析纯化法取代了以前报道的重组 LipBL 的费时纯化程序,该方法在存在 ATP 的情况下进行。需要异源共表达带有细胞质分子伴侣 GroEL/GroES 的 His(6)-标记 LipBL,才能获得具有催化活性的 LipBL。为了绘制 LipBL 的活性位点,我们进行了定点突变,结果表明,β-内酰胺酶基序中的丝氨酸和赖氨酸(S(72)-M-T-K(75))突变为丙氨酸会使 LipBL 的酶活性丧失,而脂肪酶保守基序中的丝氨酸(S321A)突变则不会。此外,还进行了突变以了解 G-X-S-X-G 基序和家族 VIII 酯酶中保守的其他氨基酸的作用。我们描述了 G-X-S-X-G 基序中的突变如何改变 LipBL 的生化特性和底物特异性。分子建模结果表明,G-X-S(321)-X-G 基序的位置位于靠近 LipBL 催化中心的环中,可能代表 LipBL 的底物结合位点。

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