Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain.
Institute for Molecular Enzyme Technology, Heinrich-Heine University, Düsseldorf, Forschungszentrum Jülich, Germany.
Microbiology (Reading). 2012 Aug;158(Pt 8):2192-2203. doi: 10.1099/mic.0.058792-0. Epub 2012 May 18.
The lipolytic enzyme family VIII currently includes only seven members but represents a group of lipolytic enzymes with interesting properties. Recently, we identified a gene encoding the family VIII lipase LipBL from the halophilic bacterium Marinobacter lipolyticus. This enzyme, like most lipolytic enzymes from family VIII, possesses two possible nucleophilic serines located in an S-X-X-K β-lactamase motif and a G-X-S-X-G lipase motif. The serine in the S-X-X-K motif is a catalytic residue, but the role of serine within the common lipase consensus sequence G-X-S-X-G has not yet been systematically studied. Here, the previously reported time-intensive procedure for purification of recombinant LipBL was replaced by one-step metal-affinity chromatography purification in the presence of ATP. Heterologous co-expression of His(6)-tagged LipBL with the cytoplasmic molecular chaperones GroEL/GroES was necessary to obtain catalytically active LipBL. Site-directed mutagenesis performed to map the active site of LipBL revealed that mutation of serine and lysine in the β-lactamase motif (S(72)-M-T-K(75)) to alanine abolished the enzyme activity of LipBL, in contrast to mutation of the serine in the lipase consensus motif (S321A). Furthermore, mutagenesis was performed to understand the role of the G-X-S-X-G motif and other amino acids that are conserved among family VIII esterases. We describe how mutations in the conserved G-X-S-X-G motif altered the biochemical properties and substrate specificity of LipBL. Molecular modelling results indicate the location of the G-X-S(321)-X-G motif in a loop close to the catalytic centre of LipBL, presumably representing a substrate-binding site of LipBL.
脂肪酶家族 VIII 目前仅包括七个成员,但代表了一组具有有趣特性的脂肪酶。最近,我们从嗜盐菌 Marinobacter lipolyticus 中鉴定出一个编码家族 VIII 脂肪酶 LipBL 的基因。与家族 VIII 的大多数脂肪酶一样,该酶具有两个可能的亲核丝氨酸,位于 S-X-X-K β-内酰胺酶基序和 G-X-S-X-G 脂肪酶基序中。S-X-X-K 基序中的丝氨酸是催化残基,但 G-X-S-X-G 常见脂肪酶保守序列中丝氨酸的作用尚未得到系统研究。在这里,我们用一步金属亲和层析纯化法取代了以前报道的重组 LipBL 的费时纯化程序,该方法在存在 ATP 的情况下进行。需要异源共表达带有细胞质分子伴侣 GroEL/GroES 的 His(6)-标记 LipBL,才能获得具有催化活性的 LipBL。为了绘制 LipBL 的活性位点,我们进行了定点突变,结果表明,β-内酰胺酶基序中的丝氨酸和赖氨酸(S(72)-M-T-K(75))突变为丙氨酸会使 LipBL 的酶活性丧失,而脂肪酶保守基序中的丝氨酸(S321A)突变则不会。此外,还进行了突变以了解 G-X-S-X-G 基序和家族 VIII 酯酶中保守的其他氨基酸的作用。我们描述了 G-X-S-X-G 基序中的突变如何改变 LipBL 的生化特性和底物特异性。分子建模结果表明,G-X-S(321)-X-G 基序的位置位于靠近 LipBL 催化中心的环中,可能代表 LipBL 的底物结合位点。