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本文引用的文献

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Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
From self sufficiency to dependence: mechanisms and factors important for autotransporter biogenesis.从自给自足到依赖:对自转运蛋白生物发生重要的机制和因素。
Nat Rev Microbiol. 2012 Feb 16;10(3):213-25. doi: 10.1038/nrmicro2733.
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Estimating the size of the active translocation pore of an autotransporter.估算自转运蛋白活性转运孔的大小。
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Molecular basis for the activation of a catalytic asparagine residue in a self-cleaving bacterial autotransporter.细菌自转运蛋白中天冬酰胺残基自我切割活性的分子基础
J Mol Biol. 2012 Jan 6;415(1):128-42. doi: 10.1016/j.jmb.2011.10.049. Epub 2011 Nov 7.
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Size and conformation limits to secretion of disulfide-bonded loops in autotransporter proteins.二硫键环在自转运蛋白分泌中的大小和构象限制。
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Crystallizing membrane proteins for structure-function studies using lipidic mesophases.利用类脂相结晶膜蛋白进行结构-功能研究。
Biochem Soc Trans. 2011 Jun;39(3):725-32. doi: 10.1042/BST0390725.
7
Autotransporter passenger domain secretion requires a hydrophobic cavity at the extracellular entrance of the β-domain pore.自转运器乘客结构域分泌需要β-结构域孔的细胞外入口处的疏水腔。
Biochem J. 2011 May 1;435(3):577-87. doi: 10.1042/BJ20101548.
8
The bacterial intimins and invasins: a large and novel family of secreted proteins.细菌 intimins 和 invasins:一个庞大而新颖的分泌蛋白家族。
PLoS One. 2010 Dec 22;5(12):e14403. doi: 10.1371/journal.pone.0014403.
9
CDD: a Conserved Domain Database for the functional annotation of proteins.CDD:一个用于蛋白质功能注释的保守结构域数据库。
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10
Secretion of a bacterial virulence factor is driven by the folding of a C-terminal segment.细菌毒力因子的分泌是由 C 末端片段的折叠驱动的。
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肠出血性大肠杆菌和肠致病性假结核耶尔森菌的内膜外域结构蛋白 intimin 和 invasin。

Crystal structures of the outer membrane domain of intimin and invasin from enterohemorrhagic E. coli and enteropathogenic Y. pseudotuberculosis.

机构信息

National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA.

出版信息

Structure. 2012 Jul 3;20(7):1233-43. doi: 10.1016/j.str.2012.04.011. Epub 2012 May 31.

DOI:10.1016/j.str.2012.04.011
PMID:22658748
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3392549/
Abstract

Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They contain C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal β domains that are embedded in the outer membrane. Here, we identify the domain boundaries of an E. coli intimin β domain and use this information to solve its structure and the β domain structure of a Y. pseudotuberculosis invasin. Both β domain structures crystallized as monomers and reveal that the previous range of residues assigned to the β domain also includes a protease-resistant domain that is part of the passenger. Additionally, we identify 146 nonredundant representative members of the intimin/invasin family based on the boundaries of the highly conserved intimin and invasin β domains. We then use this set of sequences along with our structural data to find and map the evolutionarily constrained residues within the β domain.

摘要

黏附素和侵袭素是革兰氏阴性致病菌产生的毒力因子。它们含有 C 末端细胞外的载体结构域,参与与宿主细胞的黏附,以及 N 末端嵌入外膜的β结构域。在这里,我们确定了大肠杆菌黏附素β结构域的结构域边界,并利用这一信息来解析其结构和假结核耶尔森氏菌侵袭素的β结构域。这两种β结构域都以单体形式结晶,并揭示了之前被分配到β结构域的残基范围还包括一个蛋白酶抗性结构域,该结构域是载体的一部分。此外,我们根据高度保守的黏附素和侵袭素β结构域的边界,基于 146 个非冗余的代表性黏附素/侵袭素家族成员,来识别它们。然后,我们使用这组序列和我们的结构数据来发现并映射β结构域内受进化约束的残基。