Zhang Xin, Jiang Hua, Wang Yan-Li, Zhang Zhen, Mao Xue-Qin, Chai Rong-Yao, Qiu Hai-Ping, Du Xin-Fa, Wang Jiao-Yu, Sun Guo-Chang
College of Life and Environment Sciences, Hangzhou Normal University, Hangzhou 310036, China.
Yi Chuan. 2012 May;34(5):635-46. doi: 10.3724/sp.j.1005.2012.00635.
The family members of PEX11 are key factors involved in regulation of peroxisome proliferation. Sixty-six PEX11p candidates of PEX11 gene family from 26 representative fungal species were obtained and analyzed by bioinformatic strategies. In most filamentous fungi, 2 or 3 potential PEX11ps were found, in contrast with 1 or 2 in yeast species. Compared with other fungal species, the Ascomycetes tend to have more PEX11ps, and even 5 in several individuals. The data of phylogenetic analysis and protein structure indicated that all of the PEX11ps were divided into 3 groups: I, II, and III. The members of group I and group III existed in most species, while those in group II were found only in Pezizomycotina. By MEME analysis, 5-6 conserved motifs were found in each PEX11ps. Among them,motif 8 in C-terminal had the most conservation, indicating that this motif probably plays a key role in maintaining the proper function of PEX11p.
PEX11的家族成员是参与过氧化物酶体增殖调控的关键因素。通过生物信息学策略,从26种代表性真菌物种中获得并分析了PEX11基因家族的66个PEX11p候选基因。在大多数丝状真菌中,发现了2个或3个潜在的PEX11p,而在酵母物种中则为1个或2个。与其他真菌物种相比,子囊菌往往有更多的PEX11p,甚至在一些个体中有5个。系统发育分析和蛋白质结构数据表明,所有的PEX11p都分为3组:I、II和III。I组和III组的成员存在于大多数物种中,而II组的成员仅在粪壳菌纲中发现。通过MEME分析,在每个PEX11p中发现了5-6个保守基序。其中,C端的基序8具有最高的保守性,表明该基序可能在维持PEX11p的正常功能中起关键作用。